EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-09802

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr17:23735350-23736110

Target genes

Number: 16
Name	Ensembl ID

Gm17633	ENSMUSG00000090725
Zfp213	ENSMUSG00000071256
Zscan10	ENSMUSG00000023902
Mmp25	ENSMUSG00000023903
Ccdc64b	ENSMUSG00000043782
Hcfc1r1	ENSMUSG00000023904
Tnfrsf12a	ENSMUSG00000023905
Cldn6	ENSMUSG00000023906
Cldn9	ENSMUSG00000066720
1520401A03Rik	ENSMUSG00000043747
Paqr4	ENSMUSG00000023909
9530082P21Rik	ENSMUSG00000086281
Kremen2	ENSMUSG00000040680
D930048G16Rik	ENSMUSG00000090444
Srrm2	ENSMUSG00000039218
Tceb2	ENSMUSG00000055839

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr17:23735965-23735985	CCCCCAAACCACCGCAACCA	+	6.12
RREB1	MA0073.1	chr17:23735966-23735986	CCCCAAACCACCGCAACCAC	+	6.37

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_10129

chr17:23734722-23740082

Embryonic_stem_cells

Enhancer Sequence

GTGCTTCATA GTAAGTCCCT GTCTCAGAGG GGAAAAAAAC AAGAATAATC AAAGAAGTCA 60
ATGGACATGG ATTTTCAGCC TGCACACAAG TATGACTACA CGTGTGCCTG TATACATATG 120
TATACAGCAG GAACACATAT ATACATACAC ATATAAACAC AAAACAAATT TGTAACAGTC 180
ACAGGGAGAG AGTCCTTAAG AAACATTGTC CTACGACTCA CTAGTAACTG AACACAGTAG 240
ACAGTGTACC CACCGCGTCC TACGCACATT GTGTTCCCTA ACTGCCTGCC AGTTTGAGGA 300
GAGGTTTTTC TGACCCAGCA GTTCCCTGCT CCCTCCCTTG TGGACCTTGG TTCTGCTGGA 360
CCACCAGTCA AGGGCCCTCT GCTGGGTACA CGATGGTTTC TGCTTCCCCA GGGTGGGCGG 420
CTGCCTCCAC TAGAGTTCAA GAAGCAGGAT AGGTTCATGT CTACGGTTAG TGTGTAGGCT 480
AGTGTGTAAA GGTGAACATG TGCGGGCTCA GACCACGCAG AGAAGCAGGA GTTGGGGAGC 540
CTGTTTACAC AAGCTGTAAA CTCGTCAGCC TTCCTCCCTA CTCTCAGAAC CTTTGTTGCG 600
CCCCCTCCTC CCCGCCCCCC AAACCACCGC AACCACAGAC AGGAAGGACT CTACCCACTG 660
TGCCCAGCTG CTGTTAGAGA AAGCTCTCCA CTCCTTCACC CTGCTCGCCG CGCCTCCAGA 720
GAAGGCCACG CCTATTCCAG AATGCCCCGC TCCCACCATC 760