EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-08927

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr16:18194240-18195480

Target genes

Number: 16
Name	Ensembl ID

Scarf2	ENSMUSG00000012017
Dgcr2	ENSMUSG00000003166
Dgcr6	ENSMUSG00000003531
Gm15954	ENSMUSG00000089979
Prodh	ENSMUSG00000003526
Rtn4r	ENSMUSG00000043811
Zdhhc8	ENSMUSG00000060166
SNORA77	ENSMUSG00000080364
Trmt2a	ENSMUSG00000022721
Ranbp1	ENSMUSG00000005732
Dgcr8	ENSMUSG00000022718
D16H22S680E	ENSMUSG00000013539
Arvcf	ENSMUSG00000000325
Txnrd2	ENSMUSG00000075704
Comt	ENSMUSG00000000326
Gm16314	ENSMUSG00000086965

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr16:18195294-18195309	CAAGCCCCGCCCACA	+	6.77
SP2	MA0516.2	chr16:18195293-18195310	CCAAGCCCCGCCCACAG	+	6.97
SP4	MA0685.1	chr16:18195294-18195311	CAAGCCCCGCCCACAGC	+	6.47
TBX20	MA0689.1	chr16:18194437-18194448	CTTCACACCTT	-	6.32
TBX21	MA0690.1	chr16:18194438-18194448	TTCACACCTT	-	6.02

Enhancer Sequence

GAGCCAAAAC ATGGCTGCAA AGGCCAGCCC TTGCACAAGG GACCAGAAAG CACAAAAGCT 60
GCGCCCCTCA GCCTGAGAGT TTGTCTCCCA TCCTTCTGGG CCAGCTTCCA GCACTGAAGA 120
TCCACCAGCT TTCCTGGTTT ACCATGTGCC CGTCACACAG CTCTGCTCAG GCTCAGGCAG 180
GCCAGAGACA GTGCTCACTT CACACCTTCC CCTCCCACAC AGTTCTTCGG AATACAGTGG 240
CCACTGCCAG CAAGGACCCC TGGGAAATCA GCTGATGCCA ATAAACCTCC CTCGGATACC 300
GTAGGGTCCC CAGTGTACCA TTGCTCTTCC ACATCAACCA GTCCACCGCA GCTGTGTCTC 360
GGAGCCCTCA TCCATCAGAG GCGGGGTCAG CCCAGGGCTG CTTTCCCACA GCCTGTAGCC 420
CACCCAGAGC TCAAACCCTC AGTAGTGCCT CTCAGCACTT GCCTGGCTCC ATTGCTGGGG 480
CTGCAGCTCA TCCAGCATCA TGGTCAGGAG TCGGGTACTG GCTGGGCTTG CCACCCGCCA 540
GCCTGACATT TCCAAATAGG CTAGCAGTGC TTTGTCAGCA GGCAGAACAC GCACTGTCAG 600
CAGCTCCCCA GATACCAAAT GCCAGTGTGG CTACCCAGGC ATGGCAGGAT GAGGCCTGGA 660
CTGGGCGTGG GTGCAAGAGC TGTGGACGGG AGTCCTGGGG CTGCCCTGGG GAGAATGAGC 720
TGATCTTTGC CAGCCAGCCA GCTCCAGTCT TTTCTGGCCA AAACCCCGCA AGGCTCCACC 780
CTTCCCTCTC TCATAACAGG TGTCCACCGT AGCCCTGGGT GGGCCTCAGC ACCCAGCAAC 840
TCTCGTTGGA CTGTATAGCC TGCTTCTCCC CAGGTGTCTG CACGGTCTAA AAATCAAAGC 900
CACGGCTACC CCAAGAGTCC CAGCATGGGC TTTAGGGAGC ATTTCCTACC ACATTGCTGG 960
GCCCAGCCTG GACAGCCAGC TGGGACTGGG AGAGCAGACA ACAGCCAGCT CCATGGGCCC 1020
AGGCAAGTCT ATTGAAAGAA AACGTGGGTG AGGCCAAGCC CCGCCCACAG CTCCACAGTT 1080
CCCTGGAGGG CCTCACCCAC CAGCAGGTTG GCATTCAGGG TGGGGAAGCA AAGACAGTGA 1140
CTGGAAGATG AAGTGTGAAT GACTCACGGG TGTCACAGCT CCTTGACTTT CAAGGAAGTT 1200
AGAATAGACT GAAGCCAGTC CTAGATTGTG GTAATTGCTC 1240