EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-08715

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr15:102072660-102076490

Target genes

Number: 26
Name	Ensembl ID

Krt8	ENSMUSG00000049382
Krt18	ENSMUSG00000023043
Eif4b	ENSMUSG00000058655
Tenc1	ENSMUSG00000037003
Spryd3	ENSMUSG00000036966
Igfbp6	ENSMUSG00000023046
Soat2	ENSMUSG00000023045
Csad	ENSMUSG00000023044
Zfp740	ENSMUSG00000046897
Itgb7	ENSMUSG00000001281
Rarg	ENSMUSG00000001288
Gm9918	ENSMUSG00000053724
Mfsd5	ENSMUSG00000045665
Espl1	ENSMUSG00000058290
Pfdn5	ENSMUSG00000001289
Myg1	ENSMUSG00000001285
Aaas	ENSMUSG00000036678
Sp7	ENSMUSG00000060284
Sp1	ENSMUSG00000001280
Prr13	ENSMUSG00000023048
Pcbp2	ENSMUSG00000056851
Gm10337	ENSMUSG00000071586
Tarbp2	ENSMUSG00000023051
Npff	ENSMUSG00000023052
Atf7	ENSMUSG00000071584
Atp5g2	ENSMUSG00000062683

TF binding sites/motifs

Number: 12

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EN2	MA0642.1	chr15:102073772-102073782	CCCAATTAGC	+	6.02
Foxd3	MA0041.1	chr15:102075795-102075807	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr15:102075799-102075811	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr15:102075803-102075815	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr15:102075807-102075819	GTTTGTTTGTTT	+	6.32
RREB1	MA0073.1	chr15:102073751-102073771	ACCCACCCCACCCCCCACGC	+	7.3
TFAP2A(var.2)	MA0810.1	chr15:102074117-102074129	TGCCCTCGGGCA	+	6.52
TFAP2B	MA0811.1	chr15:102074117-102074129	TGCCCTCGGGCA	-	6.27
TFAP2B	MA0811.1	chr15:102074117-102074129	TGCCCTCGGGCA	+	6.32
TFAP2C	MA0524.2	chr15:102074117-102074129	TGCCCTCGGGCA	+	6.27
TFAP2C	MA0524.2	chr15:102074117-102074129	TGCCCTCGGGCA	-	6.52
ZNF740	MA0753.2	chr15:102075430-102075443	GGGGGGGGGGGGG	-	6.03

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

mSE_05504	chr15:102073582-102075294	E14.5_Limb
mSE_05504	chr15:102075324-102081586	E14.5_Limb
mSE_07009	chr15:102073041-102077694	Heart
mSE_09125	chr15:102073033-102078990	Lung
mSE_09788	chr15:102073025-102075314	MEF
mSE_09788	chr15:102075357-102077676	MEF
mSE_10127	chr15:102069049-102075211	Embryonic_stem_cells
mSE_10127	chr15:102075345-102077707	Embryonic_stem_cells

Enhancer Sequence

TCTGCAAATT CCAGGCCAAG GAGTTAACTT CTCTGCTTCT GCTCCATAAA GTTGAAGATT 60
GGTTGGGACT CAGCAGGTAA GAGCACTGGC TGCTCTCCCA GAGGACCAGG GTTCCATTCC 120
CAGCATCTAC ATGGTAGTTT ACAACCATTT GTAATCGCCA GTTCTAACAG AACCGGTTCC 180
CTCTTCCATC TTCCATGGGC ACCAGGCACA AAAATGGCAC GCGAAAATAC ATATAGACAG 240
AACACCATAC ACATTTTTAA AGGGGGCGGG GAGGGGCATA GAACTGAAAG GTTAGGGCTC 300
ACTCCTGACT CTAGTAATCC CAGAGTTCCC CTGGAAGCAG TTGGTGGCGG TGGGGGGTGG 360
GGAGGAGGGC CGCAGATGTA GAGGCAAATG GAGCAGACAG GCTACCTACA GCTGGCACCT 420
GGCTGAATGA CTTAATGTAA GTCATTCCTG AAAGTGCTCT CAGGTCAGAA GAGGAGCATT 480
AGCAGCTGAG TGACCGGCTC AGTGTCGGCT GACTGGGGAG CCAAGGCTCT CAGGGGCGCT 540
GACCATAGCT ACGTGGCGTT TAGTGAAAGA AGCTGTGGAG GAAAACAGGG ATTCACTCAG 600
GCCCTTAGGT CCAGGAGCAG TTTGGGGTGT AGCAGAGGGT CAGGTGACAC TGGGTAAACA 660
GAGCTGAGGG GGAAGGGAGC TGCCCCAGAC CCTTTCCAAG CCTGTCTTCA TTCCTGAACT 720
GCTTCAGAAA ACAGTCATTG TAGTTTATAT GGAGTCCTAG CCAAGGCCCA GAGTTGGGGG 780
AGCCCACACT TTATACAGGA GGCTGCTGAG AGTACAAGCC TGCCACAGGC TGGGAGAGTA 840
TAGGGTTCAC CCTCAGAAGC TCAGGATATC TGAAAACTAT CCAGCCTGCA GGACCTGCTG 900
CCCGAATTTG GAAAAAAGTG GTGGTGGTGG GGGGTGGATC TTGAAGACCT CCAGCGTCCT 960
TCCTCCCATG CCATGTAACC CACCTGGTCA CAAGTCCATA CTGAGACCCA AGGTAGTGAG 1020
AGGACAGAAG AGCCTATAGG TTGGGGGTTC CAGACCAGCT CCACCACCTT ACAAAGAGGG 1080
AAGCCTTCTC CACCCACCCC ACCCCCCACG CACCCAATTA GCATAAGAAT CCTGCTGGAG 1140
TTAGATTCCC CCTCAAAAGA AAGGGGGCGG AAGGGTGCAG GGAGTTTATT CAAGACTGGG 1200
GGTGGGGTTG CCTGAATGGT AGGTGCTGGG AGGTTTGGGG AAGCCTGGAA GGCCTTTCCG 1260
GCCCTCACTT TCAGCCCATC CTGGGGTCCC CACAGGCCTG AGCGTGGGGT GGTACTCTCT 1320
CCTGCACTGA CGCCCTCCCT ACCCACAGAG CGCTGCCTCA TTTCCTCATT TCCTCTCTTG 1380
CGCAAGGCCT GGGTGCGGTC AGGCTGGCAT GGGGCAGGCA GCACCAGCCA ATTATAAGAC 1440
GAAGGCCCCA GAGAGCCTGC CCTCGGGCAG CCTTTCCCAT CCTAATGGCA CCGGCACCCT 1500
CTCTCGGCAC CCCTCTGGCA CATCATCCCC GCCCCCGGTA TCTGAAAGTG CCATGCGATG 1560
GCTCTGAGGT CGCTGTGGGT GGAGGGTTCT GCAAAGCTGG CAGGGTCTTC TGGGTCCCCT 1620
CTTCAACACT GAGCTGAGAC CTCAGCACAG GGACACCGCT CCTGGGCTCA GCAGGGGCCC 1680
CTGCTGAGGA GGAGGGGGTG GGCTCGGGGT TTTCTCCTTT TAAAGCCCAA ATTGCTGAAA 1740
TTGAGGAAAT TCCTGGCCAG GCTGAGCGGA GCTTCAAACA AACTCTTTAT AACCCGCTGT 1800
AAACGCTCCC AGCTGCAAGG CCCAGAGCTT GAGCTGCCTG GACTCACAAT CTAGCACACA 1860
ATCTCCTTGA AGACACACAC TTTTGCAGGC CAACATGACA CAGACGCCAA AGCAGACAGA 1920
CCTACAGTGG GCACTGCCTT AGTTTGGGCT GGACCTTTAA ACAGAGGAAA GCACAAACAT 1980
CAAGGCATGA GTGCTCCATG TTGGTAGATG ACAAGTCACA GAGCTACGGG CTAAACAGCT 2040
CTACTACCAA ACACCGCACT CAGTCAGCAC AACACCAGGA CACTAAAGTT TCCATCCAAA 2100
AGCCAGTAAC ACACAATCCT CCCCTACTTT AAACCACCTT CCCTCTGAGT GTGACAGGGG 2160
TGCACTACTG GCCAAACTTA CTGGCTCAAA CAGAAATGCA AAAATATTGA GCTACCAAGC 2220
CCAAAATGTC TCCAGAGGCC TAAATAAGAA TATATAGTCC CTGTCTAGGA GCCTTACAGC 2280
CAACACCCCC ACGCACACAT ACACATATAC CCAGATATTT CTGACTCAGA TGCCAGCCAA 2340
TGTGCCCAGT AGTTCCCCAT TATACTGGGC ATGGCAAGGT TAAGAATTCA TAGAAACTTG 2400
GTGCAATGTA CTAGTTCCAT CTTCAGCCTT TAAATAGTAC ATCACTTCTT ATCCCACCCA 2460
ATCCCAAAGT ACTGTCTCCT GTTTGATATC TCCCTTTCCA CTATCCCAGT TAAATCTGAG 2520
AACTCTGCCC TGGGACTAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAACT TAACTTGTAA 2580
ACAGCGCTGC TGAGTGCCAA GGAGCGAGGC GCGTTGGCGG GGGCTCAGTG ACCCGGCGTG 2640
CGCACTCCCC CAGCGCCAGC CACCCCGCCC GCTGCCCGCC CCTTCCCAGA GTGCTCCCCC 2700
CACCCCCGAG CCTAGGTCTG CAGTCATCCA TACCCAGACT GCGAGTGCGG TGCCAACCCC 2760
CAGTAAATTT GGGGGGGGGG GGGTGTCCCA GGCTCCTCTC TCAGCCCCTT CCAACAGCCC 2820
ACCCCCGCCA GGCACTGTGG CCCAGGCTTC AAAGCCGCTT CTCATCTGGA CTTTATTTTT 2880
ACTGCCTCTC CATCCCCAGC TTTTTATTGC CGCTCTGGAA AGGGGTTCCT GGGCCCCAAG 2940
CCTGGCATCT CCCATTACAG AGAGGGGGAA GATGGATATT TGGGGGCCTT ACGATTGTCA 3000
TCCCCTACCA GCTGTCACTT CCAGACCACC CCCCACTCCA AACTTGGCTT TAAACTTTTC 3060
GCTTCCTGCT TAAGTGGTGT TGGAGCCACA GAAAAAGTCA TCTGTCAAGA CAACAGAATA 3120
CATACACAGT TCCAGGTTTG TTTGTTTGTT TGTTTGTTTT TGTTGTTGTT TTAATGAGGA 3180
TGAACAGAGA ATCCAGCTTT CTCACTCTTC TGTGCACACC CTTTGCACCC CAAAAGCAGA 3240
GCATACAGGA TGCACTCTAG GACATAGCAC TTTCCAAAAA CGCCCCCGCA GCCACGCAAG 3300
GCACACGCCC TCTCGGCCTC AAGCAACAAA CATCCCCACA TTGGGCCACG AACATCTGCC 3360
AACCTAGGCG GAATGTCACA GTGCGTGGAG AGACCCCCTA CTCCACACCC ACGTCTCCTA 3420
GGTCTGTACA AGCCAGGGAT TCACACGCTC TGCATTTTTT TTTTAACACT CCCAACTTCC 3480
AGCATGGACT TTACAAACGC TGCCCACAGT GCTGGGTGCC ATAGCCCTCC GAGACTAAGG 3540
ACTGGAGGAC ACACTAGCAA CATACATCGG TCTCTCACCC AAGGACTCTG GAGGGGCATC 3600
AACCGAAGCC CTAGCTAAAC ATCCACCATA AAAACCACAT ATACTCCAAA CACTGCAGCA 3660
CACACGCAAA GGAGACGGAC TCTGGAGGCC CTCGTGTTTA AAGGGCCAGT ACCTCATATA 3720
GAAAGGACCA GAATACCCTC TTGTGCCCTG GTCCCAAACT TTACACAAGG AAATTGTAAG 3780
CACCAACCTC TCGTGCACCC AACACCCGAT CTCCGAGCTC GAATACCTAC 3830