EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-08497

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr15:89004060-89004220

Target genes

Number: 19
Name	Ensembl ID

Creld2	ENSMUSG00000023272
Trabd	ENSMUSG00000015363
1810021B22Rik	ENSMUSG00000087331
1300018J18Rik	ENSMUSG00000035757
Tubgcp6	ENSMUSG00000051786
Hdac10	ENSMUSG00000062906
Mapk12	ENSMUSG00000022610
Mapk11	ENSMUSG00000053137
Plxnb2	ENSMUSG00000036606
Fam116b	ENSMUSG00000015377
Gm17401	ENSMUSG00000090409
Ppp6r2	ENSMUSG00000036561
Sbf1	ENSMUSG00000036529
Adm2	ENSMUSG00000054136
Lmf2	ENSMUSG00000022614
Ncaph2	ENSMUSG00000008690
Sco2	ENSMUSG00000091780
Tymp	ENSMUSG00000022615
Chkb	ENSMUSG00000022617

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr15:89004076-89004091	CTGGCCACGCCCACG	+	6.37
SP3	MA0746.2	chr15:89004078-89004091	GGCCACGCCCACG	+	6.04
SP4	MA0685.1	chr15:89004076-89004093	CTGGCCACGCCCACGGT	+	6.17

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_03870	chr15:89002594-89005735	Cerebellum
mSE_07415	chr15:89003271-89005384	Intestine
mSE_08117	chr15:89001633-89006683	Kidney
mSE_08536	chr15:88999262-89011978	Liver

Enhancer Sequence

AAGCTCCCCT AGGGACCTGG CCACGCCCAC GGTCCTGGAA CCTAGGGATG CCCCCCCACC 60
GCCCCCCGCG CTCTATTCAG GTCTGCTTCC ACATTTTGGC CCTGCACCCC AGCGCACACC 120
TAGAGGGAAC ACGTGGACTG AGCTTTTGGC GCGAGCCTCA 160