EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-02620

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr10:126624610-126626550

Target genes

Number: 26
Name	Ensembl ID

Xrcc6bp1	ENSMUSG00000025436
Ctdsp2	ENSMUSG00000078429
Mir546	ENSMUSG00000072837
March9	ENSMUSG00000040502
Cdk4	ENSMUSG00000006728
Tspan31	ENSMUSG00000006736
Agap2	ENSMUSG00000025422
B4galnt1	ENSMUSG00000006731
Slc26a10	ENSMUSG00000040441
Arhgef25	ENSMUSG00000019467
F420014N23Rik	ENSMUSG00000086597
Dtx3	ENSMUSG00000040415
Pip4k2c	ENSMUSG00000025417
Kif5a	ENSMUSG00000074657
Dctn2	ENSMUSG00000025410
Gm20492	ENSMUSG00000092593
Ddit3	ENSMUSG00000025408
Gm4189	ENSMUSG00000092384
Arhgap9	ENSMUSG00000040345
Gli1	ENSMUSG00000025407
R3hdm2	ENSMUSG00000025404
U6	ENSMUSG00000089369
Stac3	ENSMUSG00000040287
Ndufa4l2	ENSMUSG00000040280
Shmt2	ENSMUSG00000025403
Lrp1	ENSMUSG00000040249

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EGR4	MA0733.1	chr10:126626030-126626046	GGTTGGGTGGGCGTGA	-	6.03
KLF16	MA0741.1	chr10:126625459-126625470	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr10:126625460-126625470	GGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr10:126625465-126625475	GGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr10:126625875-126625885	GGGGCGGGGC	-	6.02
SP3	MA0746.2	chr10:126625458-126625471	GGGGGGCGGGGCG	-	6.11
ZNF263	MA0528.1	chr10:126625528-126625549	GGGGGAGAAAAAGGATGGGAG	+	6.05
ZNF740	MA0753.2	chr10:126625418-126625431	CCGCACCCCCCAC	+	6.21
Zfx	MA0146.2	chr10:126625983-126625997	CAGGCCTGGGCTCC	-	6.22

Enhancer Sequence

ATCCTGAGCA TAGCACAGAT ATGCGGGTGG GGGCAGCCAT CTGGGCAGAC ACTGGAAACT 60
GGGGGTAGCC ATCTGCTTCC CTACAACACT CCCCCTTGCA ATAGGTACAG ACCATTCTCC 120
CGGAGAGGGG TGAGAACAAA AGAACGAGGC TGTCTGCCAC CTCCAGCCCC TCTCCTCCCA 180
CTCCAGTAAT TACTATATAT ATTGTTTTGG ACAGCCCCCC TCTCCAGCGC ATGCACATAC 240
CCAACCCAGG GGGCAGTGAG GACAGCTCAG CGGGGCTATC TTTGGCCAGC AATTGGGAAG 300
AGCTGCAATG TGAGTTCTTA TAAAACCCTT TACAGGTAGG TAGATACCCC TCGCCCCACC 360
CCCAGCCCAC CATTCCTCTG CTCCCTTTTC GGAAGATATT CAGCCAGTGT GATCTGAGAC 420
ACAAGGTTCT GGGCATCAGG CGATCACCAG AGAATTTTCC CTCCTGGCTA GCTGACTAAA 480
GGAAAGAAAT GGGTCCTCTG ACCCTTCCTC AACTTCCTCA ACTTGAATCA GCAGGAATCT 540
AGAAGTGGAA AAGGACCTTA GATATTCTCT GTTAAATCAT TTTTTTTCTG GAAAACACCC 600
GTACATGCTC CAGCCCTAAA GCCCTAGGGC TAGAGTAAGC AGATGCCCTA ACCCCAGCTC 660
AAGCTCAATG CTGGCCCCCT CAGACCTCGC ACTCACCACG TCCCCCCCGG GAGAAGCAGC 720
AGCCGCATTT TGCCAGCACT TTTCGAATCA CACGGGGACA GGCACAGCGA CCCCCTTTGT 780
GACCCCCCCG CATGGCGCCC GGGGCCCCCC GCACCCCCCA CCCGGGCCGG CCATGCAGGG 840
GGAATCACGG GGGGCGGGGC GGGGCGGGCG CAGGGCGCAC ACCCCCCTCC CTCCCTCCGG 900
GGTCCAGGCT TGGAGAGGGG GGGAGAAAAA GGATGGGAGG CGGGGGTCCA GGAGTAGACG 960
GAAGTCGAGG CAGGGGAGTC TGGAGGGAGG GCCGTGCGGG GCTGGGCCGC GGAGTTGGGC 1020
GGGGAGGGTT TCCGGAACCC CGGCGGTGCG GGGCCCAGGG TCCAGATGTC CAGCCAGAGG 1080
AAGGGGTGAT GGGGGAGGCC CGGCCGGGAT GCGACAGCCG CTCCAGCTCC GTCTCCGGCC 1140
TCGGCTTAGG GGTGGCTCTA GGCCCGGGCA GGGAGGTGCG GGGGCCGATT CCCAGAGCCA 1200
CTGGAGCCGC GCGGGTCCGG GCCGAGCGGC GAGCGGAATA ACAGGCCGGG CCACGGTGCT 1260
GCCGTGGGGC GGGGCCTCTG CGGCCAGGCT CCGCCCCTCC GCGCTTCCCC AGCCCCCTCC 1320
CCCAGGCACC TCCACGCTTG CAGTCCGGGT CCCCAGACCT CCGCCCCTCC TCCCAGGCCT 1380
GGGCTCCCTC TAGCATCCCA GCTGCAACTG CGGGGCTCTG GGTTGGGTGG GCGTGAAGGC 1440
TGGAGGTGGG TCTGCCTTGC TCGCCCCTTG GACTCTAAGA TGAAGAATTC GCAGGATGGG 1500
GCCTTGTTGT GTGTGAATGG TTCTGAGGTT CTGGCTGTCT CCCCCGCCAC CCCTCACCCC 1560
CATGCCCCGA GTAGGGCTTG TGTGCCTGGG GAACACTTTG TAGGGAACAC AGCCCAGGTG 1620
CCGCCCTCTC CCCCGACCCA TCTTTCCTCC AGGCCCCAGA ACTCCAGCTA AAACTAATCA 1680
CCAATTAAGG CGAAGTCCGG GCGCCTGGGC TGGCCCAGGG CCAGGGGTGG GGCGCGGGGA 1740
CACTCCACTC CGCCTTCGGG GGCTCGGGAC CCGCCGAAGT GAGGACACAC ATCGGGCTAG 1800
AAGAGAAGCG TGGTGTCTGC GATTTAATGG TCCCATGCAA ATTAGGCGCA AGCCTTTATG 1860
CTAATATGAA CAGAATCTAT CTGAAGTCAC CACTTTGCGC AGGATGGCAA ATTGTGCCCC 1920
ACCCAAGCCC AGCTTCTTAC 1940