EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-00856

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr1:135789330-135790490

Target genes

Number: 11
Name	Ensembl ID

SNORA32	ENSMUSG00000064814
Snrpe	ENSMUSG00000090553
Gm17713	ENSMUSG00000092104
Zc3h11a	ENSMUSG00000026464
Lax1	ENSMUSG00000051998
Atp2b4	ENSMUSG00000026463
Gm15851	ENSMUSG00000090208
Optc	ENSMUSG00000010311
Prelp	ENSMUSG00000041577
Fmod	ENSMUSG00000041559
Chi3l1	ENSMUSG00000064246

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Ascl2	MA0816.1	chr1:135789895-135789905	AGCAGCTGCT	+	6.02
Ascl2	MA0816.1	chr1:135789895-135789905	AGCAGCTGCT	-	6.02
Myod1	MA0499.1	chr1:135790039-135790052	GGAGACAGCTGCA	-	6.24
Myog	MA0500.1	chr1:135790042-135790053	GACAGCTGCAG	+	6.62
Tcf12	MA0521.1	chr1:135790042-135790053	GACAGCTGCAG	+	6.14
ZNF263	MA0528.1	chr1:135789426-135789447	CTCTTCCCCTCTGCCTCCTTT	-	6.15

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_00644

chr1:135789721-135797712

Myotubes

Enhancer Sequence

TTTGTGAAAA CAGAAGACTG TGGAGTTGAG GACAGGGTGG TTGAGGAGGA AGAGGTCACT 60
ACAAGCTCAC CTCTGCTGAG AAAGGAGAGG CCCTGCCTCT TCCCCTCTGC CTCCTTTCTT 120
CATATTCTCA GAGCTGGCAA AGGGGGGTTT CCTCAGGTTA GACCCTCCTG AAGGCCATGG 180
GCCAAGGAAG GAGGTGTGGC ATTTCCTTCA CAAGTGCCTT TGCCAGGGTC AGATGGAGTT 240
CAGTCAGATG GAGGCGTACT CAGGAAGTTA GGTAGGCACT GTGCCTCCTG GAGGTGGCGG 300
CTAGCTTGCT CTCTGGGATC CGAGGCACCT GGGCTGGTTG CCATGTCTGT GGGACATGGG 360
GAACCTTACT TTTTATTCCG CCATGGCTGG CTGGCACTGG TCCTCCTGAC CGTTCTTAGA 420
GCACTGCCAT TTGACAGGGC AGGGTGGGGG AAAGTGATGT GACTCTAGCT TGAGGGATGC 480
TCTCTGCTTG CCCTGCCAGG GTCCAGCCCA GCTCCCTCTG GTCCTGACAA CCCCAGCTTG 540
GCTGTTTCCC ATAAGACAGC GGCATAGCAG CTGCTGGGAG CAAGCTGATC CCTCTGACCT 600
TCTCTGCAGC AGAGGGACAG ATGTTCTACT TAAAATGTCT TCAGGGAGCC AACAAGGGGA 660
ATTCTTTTTG TTTTCTGGGC TTCCCTAGCC AAAACCAGGG GATTAGTCAG GAGACAGCTG 720
CAGAGGTGTG GCCACGGGGA AATCCTATCC AGTGCACAGG ATGGCCTCAG AGGACACAGT 780
TCGCCTGCTT GACCGACCTG CACTTGACCA TAAAGTCTGT CCAAGAGTGT GAAGGAAGAG 840
CCGAACTTGA GCTGAGCTTG GGATCCTGGG TAGATGAACC GGGGTTCGAG GTCTGATTGG 900
GTCTTTTTTT GCACTTTGAG TGCAGGCTAC TTTCTTTCAG AGGCCTGTTT CCACACATGC 960
AGCAAGAAGA CGAGCTTCCC TCTTACCCAG TACTACCTTT GGGATTAAGT ATGTGAGGTG 1020
CTTAAGGTGC CCACGGCACC AAGTAGCAAA CACCAGAGCC CAGAAACTGC CAGCCTTCTC 1080
CTCTTTCAGA ACAGCAGTGG CTAGGGGGTT TCCTGCCAGT GTAAACTCAT CACAGGCGTG 1140
TAGGCACCGA GGTGTGCTGT 1160