EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-00849

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr1:135608390-135609980

Target genes

Number: 10
Name	Ensembl ID

Sox13	ENSMUSG00000070643
SNORA32	ENSMUSG00000064814
Snrpe	ENSMUSG00000090553
Zc3h11a	ENSMUSG00000026464
Lax1	ENSMUSG00000051998
Gm17678	ENSMUSG00000091176
Atp2b4	ENSMUSG00000026463
Optc	ENSMUSG00000010311
Prelp	ENSMUSG00000041577
Fmod	ENSMUSG00000041559

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:135608816-135608828	AATTGTTTGTTT	+	6.22
Foxd3	MA0041.1	chr1:135608820-135608832	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:135608824-135608836	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:135608828-135608840	GTTTGTTTGTTT	+	6.32
IRF2	MA0051.1	chr1:135608623-135608641	GATTGGGTTTCCTTTTCC	-	6.07
SCRT2	MA0744.1	chr1:135608520-135608533	GAGCAACAGGTGA	+	6.36

Enhancer Sequence

TACGTCAATC TGCAAAGAAT CAGAGAGTGA GACAGCTTTG CTCCACAGTC AGAGAGAAGG 60
AAGAGGAAGG CAGGGTCAGG AGGGCTGGGG AGAGGGGTAG GAGATCAAGA GAGCTATTCC 120
CTTAAACCCA GAGCAACAGG TGAGGGTGGG GCGGGGGAGG GCAGTAATTG CAAACCACAC 180
TGTCATTGTC ATTTAAGGAA CAATTTGCTA TGGATTTTCA AACACCCAGC TAGGATTGGG 240
TTTCCTTTTC CCCTGTAGCC TAGGATGGAC AGGCACAAAA GAACTTCTCC CCAATGGTAA 300
CAGGTAGCTT TTTCATTATG TTGACCTGTA CTATTAAAAA TAAGGCATGC AATTTGACAT 360
ACCAGAAACT AAGTACATAT TAGTGAAATG TAAGACCCAA GAGCCTCTAC ACCAACTAAG 420
TCAACTAATT GTTTGTTTGT TTGTTTGTTT TTGCAAATTT CCCAGGAAGT TAACACGTGT 480
GTAAAGAAGA TGGGCAGTAT AGCAGTCCAC ACAAGTGGCC TTGGTGAAAA GACTGCCAGG 540
TTGAGTGGCT TGGTTTGGAG GAGGTGTCTT TTTTGACGCT TCCTCCAGCT GCAGTGGTGC 600
TTAGGATTCT GCTGGTACAT GACGCACAAT TCTGAAACTC ACTCATGACT TAAGCACTGG 660
AGACCTTCAC TGGCAGACTG GTGCTGGCGA CGCTGGGAGG CTGCCGCTGC TGCCACTCTC 720
CCCCACCCGC CTACCACAGC AGCCTTCTGG CTTTCCGCTT TCTCCTTCTT AGGGATGGAG 780
GCAATTAATA TCATCGCTTT CCCGCAGTAA GCAATGATCT GGGGTCTTAA TCAATCTACC 840
ACCCTTCTCC TTGACTCCTA AGCAATAAGG AGCAAATAGA AAGGGATTCC TTTATCTTTC 900
AGAGATCGAT TGGGATTCTG TGACTGCATC CCCAGAAGGA AGGTTTCTCC TGAGTCAGAC 960
TCCTGTTCTT GTAAACAGAG CCTCTGGAGA AGCCATGAAA TACTTAGGGG TGGAGACCAA 1020
GTATGAGCTA AAAATGCTTC CCCACACAGT GGCCTGCTGG CTGAGGCTGT AGGAGGTGAG 1080
GGCTGCCCTT AGGGGGCGGA TTTCAGTCCC ATTAAGAAGG TAGAGGCTCC TTCCTAGGAG 1140
CTTAGAGTGT TACAGGGTCC AACTTACATA ATGAAAACTG CATTCTGAGT TTACTGTTCT 1200
AAGAGTCCAG CCCTTTAATT CTTCAAATGT TTGCTTTCTA GTGCTTTTTC CTCCCCCAAA 1260
CTAAAGGGTA AAGGTGAAGG GAGGAAATGC CTAGAGCCAG GGGAAGGGGG AAATCCCAGC 1320
CAGCACTGGG CAGTCACTTG GCAACATCTC CCACCCCACG TGTTGCAATT GGGGACCAGC 1380
AGCCAGACTG TAAGGGCTTT TGTTGGAATC CTCCTGAGAC TGAACAAAAT CCCTCCTGAT 1440
GGGGGTGGGA GGGCTTTGGA CATGGAAGAT GCAGTTAGCA CACTCAGTCT CATTTGCTCA 1500
GTTAGGTGCC AGTTACAATG TTGTGGATGG ATCCTATCAG CGGCATCTTC AATAGGCTGC 1560
TGTTGGAGGC TGTTTAGGCT TTTGCTTGTT 1590