EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-00562

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr1:88274800-88275640

Target genes

Number: 11
Name	Ensembl ID

Psmd1	ENSMUSG00000026229
Armc9	ENSMUSG00000062590
B3gnt7	ENSMUSG00000079445
Snora75	ENSMUSG00000064837
Ncl	ENSMUSG00000026234
C130036L24Rik	ENSMUSG00000073627
Nmur1	ENSMUSG00000026237
Ptma	ENSMUSG00000026238
Pde6d	ENSMUSG00000026239
Cops7b	ENSMUSG00000026240
Nppc	ENSMUSG00000026241

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TFAP2B(var.2)	MA0812.1	chr1:88275164-88275175	TGCCTCAGGCT	-	6.14
TFAP2C(var.2)	MA0814.1	chr1:88275164-88275175	TGCCTCAGGCT	-	6.32

Enhancer Sequence

TGATGTCATG CTCGCCATAG ATACAACATC CAAAAGTTCC CCAGGAACAT CAGAGCTTTT 60
GTCATCAAGA GGCCAGGAGA TGGCTCGTTG AGTAGAGACA TTTGGCACCA AGTCTGATGA 120
CTTCAGTTTG ATCCCTTTGG ACCTTTCACT GTTTCGTTGA CGCCTCCCCT CCCACTCCTA 180
CGAAGTAAGT GCTTGCTGAC TTCCATCGCT GAACCTGTCA GCTTGCTTGG TCTAACTTCA 240
AAGGCACCAC TTTTCTTGGT TAATTATATT TGGATGCTGG GAAGATGGCC CAGATGTTAA 300
GAGTGTACAC TCTTCACCTC TGGAGGCTCA CAACCACCGT AACGCCAGCT CCAGAGGGAC 360
CCAGTGCCTC AGGCTTCCAT CGACACCCAC ACCCACACAC ACACAATTAA AAATAATAGC 420
TTTAGATCAC CTCTCTCTCT CTCCCTTTCT CTCTCCGTGT GTGTGTGTGT GTGTGTGTGT 480
GTGTGTGTGT GTGTGTACTT GCTGCAGCAC ACATGTGGCA ATCAGAGGAT ATCACGCAGG 540
AGGTGGCTCT CTCTTTGCAG CATGTGAGAC CTGCCGGTGG CAGGTTCCTT AGCCTGAAAC 600
GATTCTCCTC CCACCCATTT CCCTCTTCCT AGCAGCGGCT AAGATTTACA TCTTGCTTGC 660
TCTGTTGCTT GACTTTTAAA TGCTAGTAAA ATGCTCCTTG GTTTTAACTG CATTTTATTA 720
ACAAGACTAA GAACCAGCAT AAGAGAGCTC CAAGTCCAGG GTAAAGCCAC CACATCAGCC 780
TGCTTTTCAC GTTCACATGG AATGCTTTAC TTATGCTGGA AAATATTAAA AATTGGCATA 840