EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-00458

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr1:74904620-74905240

Target genes

Number: 8
Name	Ensembl ID

Zfp142	ENSMUSG00000026135
Cyp27a1	ENSMUSG00000026170
Prkag3	ENSMUSG00000006542
Wnt6	ENSMUSG00000033227
Wnt10a	ENSMUSG00000026167
Cdk5r2	ENSMUSG00000090071
Ihh	ENSMUSG00000006538
Zfand2b	ENSMUSG00000026197

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr1:74905189-74905207	GGGAGGAGGGAAGGAAGA	+	7.51
REST	MA0138.2	chr1:74904803-74904824	TTCGCTGTCCGTGGTGCTGAA	-	9.48
RREB1	MA0073.1	chr1:74905078-74905098	CGGGGGGTGGGGGTGGGGGG	-	6.07
RREB1	MA0073.1	chr1:74905081-74905101	GGGGTGGGGGTGGGGGGTGT	-	6.88
ZNF740	MA0753.2	chr1:74905090-74905103	GTGGGGGGTGTGG	-	6.03

Enhancer Sequence

CCAAATCTCT GCTTAGTCCC CACTGTCCTC TTAGTTAGAC AGCAAAACAG CACATTTAGT 60
GTTGCGTCCG CTAAAGAAGG ACTGACTGCA GGCAGAATGT TTGCGGTTGC GAACCTGGTC 120
GCCACCGTGG CCACGAAGAT CCAGAAAGAA TTCCGGGAGG GGCCGGCAAA GGAGAGGGCT 180
CGATTCGCTG TCCGTGGTGC TGAAGGGCGC GTTCCTGCAG GGTGGGGGCT TGCACTAGCT 240
GCCAGAGGGG GACTCAGCCA CAGATCTGAA TAATTCAAGG GTGGGGTGTA AGCTATTCTG 300
GCGACAAGTT ACAGAAGTCT TGCCGGAGAA CCAGGAATGT TGCCTCCCCC TTGCCCTCCT 360
CGGAGGACAG GACTTGGCTT TCACCTGGCC TGTACCCACA GCCCTAGCAC CCAGCCTGGA 420
GGCGGAAATC CTCGGCCCAG ATTTGTGAAT CGAGTTCCCG GGGGGTGGGG GTGGGGGGTG 480
TGGAAAGCTA GCGGAAGGGA AGGCGGGAGC AGCCGCCCAT TGGCTGGAAT TTGGCGCAGT 540
CAACGCGGTG CCGTCATCTC TCTGGATTTG GGAGGAGGGA AGGAAGATCA CTTGGGTCAC 600
TCCGCGGCTG TCGCTATGGT 620