EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-00443

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr1:74350020-74350690

Target genes

Number: 13
Name	Ensembl ID

Tns1	ENSMUSG00000055322
Cxcr1	ENSMUSG00000048480
Arpc2	ENSMUSG00000006304
Gpbar1	ENSMUSG00000064272
Aamp	ENSMUSG00000006299
Pnkd	ENSMUSG00000026179
Tmbim1	ENSMUSG00000006301
Gm216	ENSMUSG00000073650
Ctdsp1	ENSMUSG00000026176
Rqcd1	ENSMUSG00000026174
Usp37	ENSMUSG00000033364
Zfp142	ENSMUSG00000026135
Bcs1l	ENSMUSG00000026172

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1

MA0073.1

chr1:74350027-74350047

CAACCAACCAACCAACCACA

6.21

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_04917	chr1:74350006-74351472	E14.5_Heart
mSE_06785	chr1:74350019-74351660	Heart
mSE_07254	chr1:74349980-74352187	Intestine
mSE_09027	chr1:74349996-74351675	Lung

Enhancer Sequence

AACCAACCAA CCAACCAACC AACCACAGTT CATCAGCTTG ACTGTACTTT CTGGTAGGCT 60
TCTGAATTAC AGAGCAAAGG AACAGGAGCA GGCCAGGTTA GGAGTAGGAA TGGCTTCTTC 120
TTTAGACCTT AGGTTGGCCC GCTGGCTTCT CTGAGCTAGG GCTCCCTCCT CCCACCCCCC 180
ACCTTAGACA GATTCTCATC ACCAGTTTTT ACGCAGCCTG GTGACGCCAG GGCAAGCTCG 240
AACAGCCCCG GGTGGGTTCC AAGCCTCTGG CTGGCTCCCT CCCTCCCTCT CCCCACCAGC 300
TGAGGACCAT GACCGCCTCC ATTCTCACTT GCTGCACGGC CACTCTGGGG CCCCGGAGTG 360
GGGGACACGT CCTCAGACAA ACAAGCCACT CAGCCACTGA GAGGAGCACC CTACAAGAAG 420
CGGGTCAGCT CGCGGGTGCG CACCGAATGC GGTTGCGCCA CAAGCCCGGG CCATATGTCC 480
TGCCCGGGCG CACATGGAAA GTGAAGACCG GAACAGGCAG AACGAAAGGA CCCTAGCCTG 540
GCTCCGGAGC ACGACCGGAG TCGGCCCGCG CGTGCCAGAA AAGTTCGGGC GCCTGGGCGC 600
AGCGCCGCCC CAGGCCACTT CCATTCCCCG CCGGTCTCGG GTCCCCACCT CCAACGGCCG 660
CAGCCCCCTC 670