EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM091-00385

Organism

Mus musculus

Tissue/cell

Limb_E14.5

Coordinate

chr1:72063660-72065910

Target genes

Number: 7
Name	Ensembl ID

Atic	ENSMUSG00000026192
Fn1	ENSMUSG00000026193
Gm5528	ENSMUSG00000060125
Mreg	ENSMUSG00000039395
D230017M19Rik	ENSMUSG00000085769
AC120136.3	ENSMUSG00000093333
Tmem169	ENSMUSG00000026188

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)	MA0730.1	chr1:72064850-72064867	TGACCTTCATTTGACCT	-	7.7
RREB1	MA0073.1	chr1:72065609-72065629	CCACAGCCCACCCCCTCCCC	+	6.6
Rarb(var.2)	MA0858.1	chr1:72064850-72064867	TGACCTTCATTTGACCT	-	8.2
TFAP2B(var.3)	MA0813.1	chr1:72065162-72065175	TGCCCCAGGGGCA	-	6.78
TFAP2B(var.3)	MA0813.1	chr1:72065162-72065175	TGCCCCAGGGGCA	+	6
TFAP2C(var.3)	MA0815.1	chr1:72065162-72065175	TGCCCCAGGGGCA	+	6.34
TFAP2C(var.3)	MA0815.1	chr1:72065162-72065175	TGCCCCAGGGGCA	-	6.67

Enhancer Sequence

ACCACAGAGA CACTGGGAGC AGGGAAATCA CCATACTATG GGTGCCTTTT TTATATTTCA 60
CGCAACAAGA CTACAAGTCT CAAATGCACA TGAACACTCT CTGGGGTAGG CTACAGGCTA 120
AATCATGAAA CCGTTAAAGC TGGGTTTTGA CCCAGGGAGT CACTATGCAG CCCTGAGTAT 180
AAATGTATAG ATGCCCATGA TAGAAAAGAA GGATCTCAGC TTGTTAACCT ACCCTGAATC 240
CTGAAGACCC TAGAAAGGGC AGAGCACTGA GCCAGAAGCG TGCAGAAGAC AATAATGAAG 300
AACAGAGCAG AAAGCCATGA AAGGCAGTTG TTTAAAATTA AAAAAAAAAA AATTGTAAAG 360
AGTAAAGAGC TGGATGTTGT GGCTCATACC TCTAATCCCA GCACCAGGGA GGCAGGTGGG 420
TCCCTGTGAG TTCGAGGCCA GACTGATCTA CATAGTGAAA CCTTACATTT AAAAGAGGAA 480
ACTGAAAAGG CAATAAAAAA TTAAATTAAA TTACAAGTTG GCTCTTGGGG CTGAAGAAAT 540
GGCCTAACCA CCCTTTAAAG ACAATAATAG CTCAAAGTGC ACCAAAACTG TGTGGCTGAC 600
ACAACACAGG CGAGGAGGAA GCCCAGCACT CGTCCCAAAG CTACACTCGT GCTCTTGGGT 660
GTGTCTTGCT TTCTTCCCAA GCACCTCTCT CAGTCCGCAA GCTTAGCATC TGCACTAAAA 720
TCCTTTCATT GACTTCAACT CTGCTTCACA CTGGTTTTCC CTGACATTCT TTTCTGTAGC 780
TAGGTCAGGT GTCTGAATAG AGGTCTCTGA AGAAGGAACT CAAGCTACTG TCAGCACTAT 840
AAAGCTGTGG AGTGGGTGGG GGTGGGGGGG TATGTGTGTG TGTGGTGTCT GGTGTGATGT 900
GAGTGAGTGG TGGTGGTATG TGTGCTGTGC TGTGTGTGGT GGGTACTGTT AGTGTGTTGT 960
ATGGTGGGGG GGGGACATGG TATGTGTGGT GTCTGGGTGT GGGTGTGTAT ATCCTGTTGC 1020
CACTGACAGA GTTTTAAGAA TTTTTTTTTT CCTAGTTGAA ATCAAGAGTT CAAGGTAAAA 1080
TTCGCAGATG CAGAAAATGC TCTCATAACA CTCAGCCACA GTGAGAATTT GGAACTATTC 1140
AGTAAATCCA AGTGAGCAAA AGAATACATA AAGTGGCTTA TGAGCTCTGG TGACCTTCAT 1200
TTGACCTCTC TGCTCTACCC TCCATCTCTG CTTAGATCCA GCCATAAGCC TTTATCAGAT 1260
ATCAAGTCAT CAAGTTTCCC CATATTTGCC ATAAAGTGTT GTCACAGACT TGAGAAAAAC 1320
TTTGCAGGAA ATTTAAGCAT TTAAATTCTG TCATAGAGAG TTGATACTGT AGTTCAAGTT 1380
ACAAAAGCAA GAACAAATTC AGTAACCATA CATACAAACT TACCATGTGC TATAAGAGAA 1440
CTAAAGAGAG CAGGAACCAG CTCCTTGGAA TATTTTTGGC CTACATTTAG TCACAGTTAC 1500
AGTGCCCCAG GGGCAAATGT GGCCAGTCTA AAAAGGTTTA CTCTAAGTTC TAAAGTTAAA 1560
CTTGATTCAT AGTAGTGCTG TGCCTCTGGG GTAGGTGGCC AATGTTCTGA ATCTAAGGGC 1620
TGTTTTAAGG GGAGAAAAAT TAGATCAAGA TGGAAAATGT CCAACGAAGA GGCTAAATAT 1680
GCTCAGGAAG TGTGGTTAAA AGCCCATGAA TATTAATTGG GCCAGTTCAA ACCATAAGCC 1740
CCTCAATAAA ATAAAAATAT TTTTGGGCTC TAGGAAAACA TAAAGTGGGC TGTTCTTCCC 1800
AGGCTCTCAG AAATCTCCGC ATTCTCTGCA TTTGGCACTG CTGGTCCCAG ATTGCAAATT 1860
ACAGAGAAAC TGTATGTGGA GTACTTCCTG ATTCAACGTC CCCAAGCAAG AGAAACCAGA 1920
GTGAGGCTGT GGGGCTACCT CATTGAGAGC CACAGCCCAC CCCCTCCCCA AGTGCCTGGT 1980
AGAGACTGGC TTTGTCATTT CCTTCCCACA CTCCCACCAC ACCAGAAAAG AGAGCTCTGA 2040
GCTCTGAATC TTTAGCCAGA TGGAGAAATC TCTGCTCAAC CTTCTCAGGT TGGCTCTCGT 2100
GTCATGCCTT TCCCTACTTC CCTGTTCATT TCCTCATGTG TGTGCCCTAA ACTAGTTTAT 2160
ATACCAGACA GACTTCCTTT AGATGGGAGG GGGAATCACA TATTGAGCTA CATACAAAAA 2220
GCTTTCAAGA CTTGGGAATG TGTGGTCTTC 2250