EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-24292

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chrX:99276520-99277020

Target genes

Number: 9
Name	Ensembl ID

Nhsl2	ENSMUSG00000079481
Rgag4	ENSMUSG00000049191
Pin4	ENSMUSG00000079480
Gm16471	ENSMUSG00000081969
Ercc6l	ENSMUSG00000051220
Gm9103	ENSMUSG00000084142
Rps4x	ENSMUSG00000031320
Cited1	ENSMUSG00000051159
Hdac8	ENSMUSG00000067567

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF1A	MA0046.2	chrX:99276853-99276868	GGTAAATTATTAACC	-	6.22
HNF1A	MA0046.2	chrX:99276853-99276868	GGTAAATTATTAACC	+	6.44
HNF1B	MA0153.2	chrX:99276854-99276867	GTAAATTATTAAC	-	6.23
HNF1B	MA0153.2	chrX:99276854-99276867	GTAAATTATTAAC	+	6.5

Enhancer Sequence

CACATATACT TCCTCCAACT CCACAGGCTC CATCCGACTC AAACAGGTCC CATCCCCCGC 60
CCCCCACTGG GTGAGGATAA TTGCTTTACC GTGCTCTCAG TATCTTGAGT TTTTTAATTA 120
TGTATTTATA ACAAGGGGGG CTGGGGAATA TATAGCTCAG TGCCAGAGAG CTTACCTAGT 180
GTCTGCAAGG TCCTGAGTTC CGTCCCCAGC GCTATTGTTT TAAATAAGTA AATAAACAAG 240
AAAACACGCT CAGACCACCT GTTGTAATGA AAAGCATACA CGAGAACAGG GATCTGGACT 300
GGTCTTCACC ATGTGGGCAT TGAATGGCCT GAGGGTAAAT TATTAACCTT CAGATCTCCA 360
TGTTCCTCCT CGACAAATGG AGCCATCAAA GCCTCTGTCC TGCTGTCCAT CCAGAGTTGC 420
TTTGAACATC AAGGGAAATA ATGAAATTGT ATGTGCTTTG TCCTGGCTAT CATGGTCAAA 480
GTCATTCCTT TTGGTTCTTA 500