EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-24255

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chrX:71675160-71675450

Target genes

Number: 20
Name	Ensembl ID

Hcfc1	ENSMUSG00000031386
Irak1	ENSMUSG00000031392
Mecp2	ENSMUSG00000031393
Flna	ENSMUSG00000031328
Emd	ENSMUSG00000001964
Rpl10	ENSMUSG00000008682
Snora70	ENSMUSG00000064981
Taz	ENSMUSG00000009995
Dnase1l1	ENSMUSG00000019088
Atp6ap1	ENSMUSG00000019087
Gdi1	ENSMUSG00000015291
Fam50a	ENSMUSG00000001962
Plxna3	ENSMUSG00000031398
Lage3	ENSMUSG00000015289
Ubl4	ENSMUSG00000015290
Slc10a3	ENSMUSG00000032806
Fam3a	ENSMUSG00000031399
Ikbkg	ENSMUSG00000004221
G6pdx	ENSMUSG00000031400
Gm6880	ENSMUSG00000079536

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myod1	MA0499.1	chrX:71675337-71675350	TGCAGCTGTCGCC	+	6.52
Myog	MA0500.1	chrX:71675336-71675347	CTGCAGCTGTC	-	6.62
Tcf12	MA0521.1	chrX:71675336-71675347	CTGCAGCTGTC	-	6.14

Enhancer Sequence

GTGTGGTCCT CTTCTCCAAA GACAGGGCTC CATCGGTGGC TGTTTCGTAG CTTCCGAGAC 60
TCCAGAGGTC CACACCCTTC CCCCCACCTT AGGCCCAGTT TGTTCTGCCG CAAGCTTCTA 120
ATTATTCGCT ACCCAGATTA TTTAGGCTAG TCGGATTGAA TCTGCCCTTC CCTTCACTGC 180
AGCTGTCGCC TAAGGGCTTG GCCCCTAGTG CTAGAACTCT TTAGGTAGCA GACATTTTCT 240
GTTGATCAAA CTGTTTCTGA AACACGTTTT GCACTGTAGG CCAGGTAGAC 290