EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-24190

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chrX:20002950-20003590

Target genes

Number: 9
Name	Ensembl ID

Rp2h	ENSMUSG00000060090
Gm9085	ENSMUSG00000084137
Gm14537	ENSMUSG00000082855
Phf16	ENSMUSG00000037315
Ndufb11	ENSMUSG00000031059
Uba1	ENSMUSG00000001924
Cdk16	ENSMUSG00000031065
Usp11	ENSMUSG00000031066
Araf	ENSMUSG00000001127

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PLAG1	MA0163.1	chrX:20003127-20003141	CCCCCGAGAGCCCC	-	6.35
RREB1	MA0073.1	chrX:20003219-20003239	GGCGGGGGGTTGGGGGGGGG	-	6.43

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_11758

chrX:20002693-20004525

Placenta

Enhancer Sequence

CCGGAGGTAG GCGCTCTCGA GGGTGGCCTC GGCACCAGCG AGGTTGTGGG CGTAGTGCGG 60
GTTTAGTGGC GGGAGTGGCG GCCTCGAGGA GTGGGACGCG AGCGGCGTGG AGCTTGGGGT 120
CCCGGCCTTG CCACCCTCGG GGTCGCTCCA GCTCCACGTA GCGGTTGCCC CGGGGTCCCC 180
CCGAGAGCCC CGGAACACAG AGCGTGTGTG GGCTGAGGTA AAGTGCCCAG TCGCCCCGCT 240
GCTGGTGGCG CGCTGTGCCC GGTGGCCCGG GCGGGGGGTT GGGGGGGGGC GCGCGGACAC 300
GGACACACGA GCTGGGCTAC AGCCTCCCGG ACACCTCCGG AGGCGTTGAG CGCCATAACT 360
GTGGCGGCCG TTCCCTTCGG AGTCCCCTCC GGGTGCCCCT TTCCGTGCTT GTCCTGTGCT 420
ATCAGGGACT CTTGGGGCCA GACCTCGGGG CTAGAGGGCA TGCTCTTTCT GCTGCCTGTG 480
GCTGCCGGGT CCGAGCAGCG AGAGGGCGCA CCCTGGCTGT TTGAGCCTTG CGGAGCGGGA 540
AGATACTGAG GGTCCGGAGA GGGCAAGACG GGCAGTGTGG GGAGCAACCA GGCACTCTGA 600
GAGCTGAAAT GCCAACCTAG TGGGAGTGCG GGTGCCCTTC 640