EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-23964

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr9:114886750-114888650

Target genes

Number: 8
Name	Ensembl ID

Cnot10	ENSMUSG00000056167
Dync1li1	ENSMUSG00000032435
Cmtm6	ENSMUSG00000032434
Cmtm7	ENSMUSG00000032436
Gpd1l	ENSMUSG00000050627
Gm9846	ENSMUSG00000050621
Osbpl10	ENSMUSG00000040875
Stt3b	ENSMUSG00000032437

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Rhox11	MA0629.1	chr9:114888523-114888540	TGGCTTAACAGCGCAGT	-	6.43
ZNF263	MA0528.1	chr9:114887724-114887745	GGAGGAGGAGGAGGAGGCGGC	+	6.14
ZNF263	MA0528.1	chr9:114887605-114887626	TTTCCCTCCTCCTCTTCTTCC	-	6.43
ZNF263	MA0528.1	chr9:114887599-114887620	GCCCTCTTTCCCTCCTCCTCT	-	6.6
ZNF263	MA0528.1	chr9:114887721-114887742	GGCGGAGGAGGAGGAGGAGGC	+	6
ZNF263	MA0528.1	chr9:114887466-114887487	GGAGCTGGAGGAGGAGGAGGG	+	7.54
ZNF263	MA0528.1	chr9:114887608-114887629	CCCTCCTCCTCTTCTTCCTCC	-	9.39

Enhancer Sequence

GAGAAGAACC CAGCGTGTGG GTGGGCAAAA GAAGTTTCTT GGCGGACAGT GAAGTGTGTG 60
TATGTGAGTC TTCTCATTTG CCCTCTGGTT TGGGCCCCTC TGGCTCTCGG GTGTGCAGTA 120
TCCAGCGCAG TGACTCCTCA CTCTTGTTTG TCTGTGCCCA TCACCCCTGG GATCAGGGTG 180
AAGTGAGCGT GTGAGGTCAG GAGAACGCTC ACTGGAAGGC ACCTAGTCCT AGCCTGGTAT 240
TCGCTGTGCA TCCATCCGAT CTCTGACTTG TGGAACCGGC CCCAGCTGAC AGCCTGCTCA 300
CCTGGGAGAG TCACCTGCTG CCCCTTCCTT TCCGCTTTCA AACCCATGGG AGAGCCCCGA 360
GGGCCTTGCT GCCCTGTTTC TAGGCTCCCT CAGTGAGGCT AATTTTCAGG TGACCGTGTA 420
CGTGCTTGGC CCAGGCTCCT GTGCGCCGAC ACACCGAGAG GGAGCGTGCT GGTGTCAGGG 480
ACCGGGCGGG TCCATATCCG GGTGTACCGG GTGGGTAGGA CCGTCCCTCC CTCCAGGTCT 540
CGAGGTGGGT TGGGGGTGGG GAGAAGGGCG TGCGGAGATT TCCCCGGTCA GGATCCAAGT 600
GAGGGGGCAA CAAAAGGCTA GGGTGAAGGG GGCCGATGTA GGGCGTGCCC ACTCTGTCTG 660
CCAGGCCCGC CCCAGGAGCA TCCTTAGCCC GGGCTCCGAG CGACTGCAAG GTTCGAGGAG 720
CTGGAGGAGG AGGAGGGACC TGGAGCCCCG AACTTGCCCG AGAAGTGGCT GGAGGGCGGG 780
GCCGGGCCCT GGTCGAGGCG GGAGGAGGGG CGGCCGCAGC TGCAGCTAGC CCGGCTGGCT 840
TCCTTCCCAG CCCTCTTTCC CTCCTCCTCT TCTTCCTCCT GTATGAGTCA GGCATTTCCC 900
GGGGAATCAG AGCAGCCACG CGCGGCCCGG GAGCCCGGAG CTGTAGCGGC AGCGGCGGCG 960
GCGGCGGCGG CGGCGGAGGA GGAGGAGGAG GCGGCGGCGG GGCTGCCACC GCGGCGGCCA 1020
CCGGCTCCCC GGGCGCGCAG CGATCATGGA GAGGGCGGCC CAGAGCACAG ACGGCGGCGG 1080
TGGCGGGGGC AGCAATAGCA GCAGCCGGAG CAGCAGCCGC GCCACTTCGG CGGGCTCCTC 1140
GCCCTCCTGC TCCCTGGCTG GCCGAGGGGT GGCCAGCCGC TCTGGGGCCG CGGGACTGGG 1200
CGGCGGGGGC AGCCGCAGCA GTCCCGGCTC GGTGGCGGCT AGCCCGTCCG GAGGAGGCGG 1260
CCGAAGGAGG GAGCCGGCGC TCGAGGGCGT GCTCAGCAAA TACACCAACC TCCTCCAGGG 1320
CTGGCAAAGC AGGTAAGGAG TCCGCCGCTC GCGCCCCCGC GCGCTCCCCG GGTGTGGAAC 1380
GTGGCGCCAC CCGCGGCTGG GGACTGCCTG GACACCTCGT CCTTCCTGCA CCCTGGCGGG 1440
CGCCGCAGCA GCGGGAGGGA GGCAGGAACC CTGGTTTTCC TTGGGTGCTG AAAGCTGGCA 1500
GAATCTGGAG TGGCGTCGGG TGCGCCCTAG GTAGTTCCGG TGTCCTACCT GCTGAGGGTC 1560
TCTCACACCC AAGAAGAAGG GTTGAGAGGG ACCCGCAGAG AGGGAATGCT CGGTGCCGGG 1620
CGCAGAAAGC ATTCGGCACT CGTTGTCCAG CACAGTTCTC CCCACTCCGT AGTTCCTGTT 1680
AAAGTACGAT GTTTGAAATA CAACAAGGAA CCTGTCACTT GTCATCTTTG GAGTGTCCCG 1740
CTCCCAGGGT GTGCATATCC CTTCCCTAGT GGGTGGCTTA ACAGCGCAGT TTGTTATTAT 1800
TCCCCGTTCA GGTGCATGTG AAGTTTCTTT GCTTCCCTCT CAAAGTTGCC AAGCCTTGAA 1860
TTGGGCGTGG TGGCAGATGC TTGTAATGCT AGGCACTTAA 1900