EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-23838

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr9:107302610-107303330

Target genes

Number: 27
Name	Ensembl ID

Mapkapk3	ENSMUSG00000032577
Cish	ENSMUSG00000032578
Gm17040	ENSMUSG00000091366
Gm17041	ENSMUSG00000090570
Hemk1	ENSMUSG00000032579
6430571L13Rik	ENSMUSG00000037977
Cacna2d2	ENSMUSG00000010066
Tmem115	ENSMUSG00000010045
Cyb561d2	ENSMUSG00000037190
Nprl2	ENSMUSG00000010057
Rassf1	ENSMUSG00000010067
Tusc2	ENSMUSG00000010054
Hyal2	ENSMUSG00000010047
Hyal1	ENSMUSG00000010051
Nat6	ENSMUSG00000079334
Hyal3	ENSMUSG00000036091
Ifrd2	ENSMUSG00000010048
Sema3b	ENSMUSG00000057969
Gnai2	ENSMUSG00000032562
Slc38a3	ENSMUSG00000010064
Gnat1	ENSMUSG00000034837
Sema3f	ENSMUSG00000034684
Rbm5	ENSMUSG00000032580
Rbm6	ENSMUSG00000032582
Traip	ENSMUSG00000032586
Cdhr4	ENSMUSG00000079323
6230427J02Rik	ENSMUSG00000042106

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1

MA0073.1

chr9:107302850-107302870

CCCCACCCCACCCCCTGCAA

6.27

Enhancer Sequence

ACACGTAAGT GGCCTCAGCC GGCCGCGGGA CCCCGCAGAG CCCCGCGCTC CCTTGCGCCC 60
CTCAGCCCGC GTCTGCCCCT CCACTCTCCA CTCCGGGTGT CGGGGCGGGG GCTCTGGTTC 120
CCATGGCATG CTGCAAGTGA GGGTGTCGGC TACAAACCCC CGTGGGCTGG CAGCCAGGGT 180
CCCGGAGCTT CTGGCTGCGT CGCGAAACTT CCTTGCGGTG CCCTGCTTCC CATAGACCGC 240
CCCCACCCCA CCCCCTGCAA CGGGACAGAG CAAAACATCT TCAAGCTTAG GGATGGGGTG 300
GGGGTCGAGT CTGCCAGTTT ATACTCCTGC CACTGTCCGG TGATAGAGGA GCCTGAGGTT 360
GGTCGAGAGA ATGGCCAACG ACCCCTGCCC GGTAGACTTG GAGCCAGGCA TCTGCCCAGT 420
GTTTTATCCC TGGTGGGAAC CTGGCGCTTT AGAGTCAGAC GTGGGGTTAC ATCCACACCT 480
GTCTTCTTGG GCCTTTTCCT TGGGGGGGGG GAGCGATACT GGATGCAGAG GGTGCCAGCG 540
CCTTCTTGCT TCGGTCAATG TCACCTGTTC TTGATCGCCC ACCTGAGGGG ACGTCCCTGG 600
ATAGCTCAAT AAGGAGGTAA AGGTGCTGGG GTTGGGTCAG AAGGTGAATG ACAGGGAGGA 660
CCCCTGCCTG CTCCTGATGC TGACACTGTC GCTCCTGCTA CCAACTGGGT AATAGCATTT 720