EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-23810

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr9:106041960-106043360

Target genes

Number: 16
Name	Ensembl ID

D030055H07Rik	ENSMUSG00000086296
Glyctk	ENSMUSG00000020258
Wdr82	ENSMUSG00000020257
Ppm1m	ENSMUSG00000020253
Twf2	ENSMUSG00000023277
Alas1	ENSMUSG00000032786
Poc1a	ENSMUSG00000023345
Dusp7	ENSMUSG00000053716
Rpl29	ENSMUSG00000048758
Acy1	ENSMUSG00000023262
Abhd14a	ENSMUSG00000042210
Abhd14b	ENSMUSG00000042073
Pcbp4	ENSMUSG00000023495
Gpr62	ENSMUSG00000091735
Rrp9	ENSMUSG00000041506
Parp3	ENSMUSG00000023249

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

LHX2	MA0700.1	chr9:106042340-106042350	ACTAATTAAC	+	6.02
mix-a	MA0621.1	chr9:106042340-106042351	ACTAATTAACT	-	6.14

Enhancer Sequence

AGAGCAGCCA CTTTACAGAC TTTCCTGACG TCCACAATGG GTGGGTAAGA GAAATCAAAC 60
GCTAGTCTCA AAGACCAGTG ACCCACCGCC ATCACCTCTC ACCCAGCAAA GTGGGCAAGT 120
GTAAGTGGCA GGGCTCTCTG GGTCTGTCCA ACTTTCATCT GCTCTCTGTC TCTGGGTGGG 180
CTCCAGCCCG CTGGAACTTC TTCTTCCTGG CCCTCCCAGC TCAGGGCCAG CCTCTTGAGC 240
ACCCTGGCAG CCTTCCAGGC CTCCAAGGAA TCTACTGCCT CTGCCACAGC ATCATCGCCA 300
CCGTTGCTCT GGCTTCGAAA ACGCAATTAC AGCAAACAAC AGCCGCCTGC CTCGCTTGAG 360
CCTCGCCATC CACACCTGGA ACTAATTAAC TAAATTAGGT CTTAATGAGC TACACTGGTC 420
GGAAGGCCTA TTTTTACTTA ATTATCCACT AATGTGCTTG GCATGAAGGA GTGTGGACCT 480
GGAAGATGGT TCAGCGGTGG CAGTGGCAGC CACCTCCTCC TTCACAAGGG ACACCCAGGA 540
AGGATGCCTG TCTGCCAGGA GTGAGCCTGA AGGACCTGAG GTCCCAGGAG TGGAGGCAAA 600
GTAGAGGTCA CAGATAACAC CTGCAGGGAC ACCCTCTCTA CATGCACACA CAGGCACACA 660
CAGGCATACA CACACACACA CACACACACA CACACACACA CACACAATGC TGTCTTTTAG 720
GCTACCCTGC CTGAGAAGAG ACCAAAGCCA CACTGTAACC AGCTGATGGT GTGAACAGGC 780
AGAACTTTCC TATTCCAAGA TCGCTGTCAA AAGAGGACAA AAAGACTCAG AGTAATTACT 840
CTGTCTCCCG TAATGGGGAG GCCAAGGAAC AGAGAGGTGA AAGGCTTTTG GGGGAGACAC 900
ACAGCTAACT AGGGGGGGAT GGAGGCGAGT GACCCTTTGA AGAAGCATTT TAGGCCACAA 960
GGGGTAGCCA AGCCTAGTGA TGCAGGCCTG GAACCCCAGC TAGTTAGGAA GCTGAGGTAG 1020
GAGATTCACA AGTTCAGGCC CTTTCTAGGG AATTGATTGA GACTCATCCT CAAAATTAAA 1080
ACTGGAAAGA GGGCTGGGAC GGAATTCAGT GAGAGAGCAT TTGCCTGGCA TGCGTGAGAC 1140
CATTGGTTCA ACCCCAGTAT GGAGGGGGGT ATTGATTGGA TCTACCAGCA CTCTGTGTGT 1200
GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTATTG ATTGGATCTA 1260
CCAGCACTCT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTAGATAT 1320
GAGCAGATAT GTGCAGGTGC CCACAGAAGC CAGAGAACCC CTCCCCCCGG TGTGGAAGTT 1380
ACAGCTGTAT CGCTGCCTGG 1400