EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-23245

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr9:57369220-57370480

Target genes

Number: 16
Name	Ensembl ID

Commd4	ENSMUSG00000032299
1700017B05Rik	ENSMUSG00000032300
Ppcdc	ENSMUSG00000063849
Scamp5	ENSMUSG00000040722
Gm6166	ENSMUSG00000074280
Rpp25	ENSMUSG00000062309
Cox5a	ENSMUSG00000000088
2310046O06Rik	ENSMUSG00000032305
Mpi	ENSMUSG00000032306
Scamp2	ENSMUSG00000040188
Csk	ENSMUSG00000032312
Edc3	ENSMUSG00000038957
Clk3	ENSMUSG00000032316
Arid3b	ENSMUSG00000004661
Ubl7	ENSMUSG00000055720
Stra6	ENSMUSG00000032327

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Rarb(var.2)

MA0858.1

chr9:57369256-57369273

TGTCCTTGCTGTGACCT

6.05

Enhancer Sequence

CGGTAAGGTC CGCGCCCGCC ACAGCCCTCG CTCGCGTGTC CTTGCTGTGA CCTGGGCTCC 60
CGCCGCCACT CGAGGGCAGG CTCCCTGGCG GCCTAGCCTT TGCCCTGCGA GCCGGCATTG 120
GAGCCCGGTG ACCGCAGTGC GTCCGCGGCC GTCTGGAGTC GTGTAGGAGA CTCCTCCGGG 180
CCTCCCTCCC CGCCACTTCC TGATGCCGAA CCCGCGGCCA GTCAGGTGTG TGGACTTGCC 240
GGGGTCGCCG AGGACGAGCT CAGCACTTCC TTTCAGTCTC TGGGCCGTGA CCGTTCCCTG 300
CGCTGACCCC GCAGCCACCT GACCGGGAGT GGCCCCCGCC GGCCTGCGGC ATCTTGGCGA 360
AGGTGACATT GAGCCTCCGG GCGCGCCGCC CGCCTCTGCG TTTCCTAGAA CACAATTTGA 420
TTCCCCAGTG GGACACAATA CCCTTTTAGC CCTGATCAGG CAATTCTCTG CTGGCATTTT 480
TGTGTCACCT TCATAACTGG GTACGGCCAC GTTTGAGGAC TGTTGAGCCA CATTTTAGCC 540
CTGCGTTTCA AATAGATAAT TTAAAGTGTG GTTTCTTGCG GCTTGTAAGA GAGCCTGAAC 600
ATTGACAAAT ATTAATGGAA AGAATGATAA CGTTTACAAG ATTGGGTACC AAATACTGAG 660
GAATACTGGG TGTACAAACA TGGGAAAGCT TCGTGGATTC CCCTCCACCC GTTTAAAATG 720
AGAAGCTTCA GTGCTGACTT ATGAAGTATT ATGTTTGGTT GCTTGTTTCC CCTTCTGTGT 780
GATCAGGAGA TTTTGTGTCC CATCACTGTC CACCCCCATT GCTGAGGGGG AACCAAGGGC 840
CCTGCATTGC TAGATAATTG CTCTGCCACT TGGTGTGTTC TCAGACCCTC TCCACTTAGC 900
ACGGTACATC TATCTTACTT TTGGTTTTGT TTGGTTGTGG TATGTGTCAG CTGTGTAGCC 960
TGGCTGTCCT GGAACTCTTT GTAAACCAGG CCGGCATCGG CCTAAAATAA ATAGGAGTAT 1020
TTTATTTTAG AAACAGGGCC TCTATAGCCC AGACTAGACT AGAACTCAGA ATGGTACTAA 1080
AAGGGCTATC GAGGAACTTA TTGCATTCCT CTTGCCTCCT AAGTGCAGGG ATTAACCTTG 1140
GGAGCCACCA CACCCGGCAC AGGCATTATA CTTTAATCAC AGTAGTTGTG TGCTTGGATC 1200
CTGGTCTGAG ATACATTAGT GTTTTATGAG ATTTAGTTCA TGTGTGTAGA TATAAAAATA 1260