EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-23244

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr9:57314810-57315620

Target genes

Number: 15
Name	Ensembl ID

Ptpn9	ENSMUSG00000032290
1700017B05Rik	ENSMUSG00000032300
Ppcdc	ENSMUSG00000063849
Gm6166	ENSMUSG00000074280
Rpp25	ENSMUSG00000062309
Cox5a	ENSMUSG00000000088
2310046O06Rik	ENSMUSG00000032305
Mpi	ENSMUSG00000032306
Scamp2	ENSMUSG00000040188
Csk	ENSMUSG00000032312
Edc3	ENSMUSG00000038957
Clk3	ENSMUSG00000032316
Arid3b	ENSMUSG00000004661
Ubl7	ENSMUSG00000055720
Stra6	ENSMUSG00000032327

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myog	MA0500.1	chr9:57314955-57314966	GACAGCTGCTG	+	6.14
Tcf12	MA0521.1	chr9:57314955-57314966	GACAGCTGCTG	+	6.02
ZNF263	MA0528.1	chr9:57314905-57314926	TCTCTCGCCTCTGCCTCCTTC	-	6.21

Enhancer Sequence

CCATCCCTCC CACACACACC ACAGACAGGC TGGGGTGGAG CAGCAGTGCT TCATGCCCAC 60
CTCTGAACTT TGTCCATTAC CACACTGAGA TGCCCTCTCT CGCCTCTGCC TCCTTCCAAA 120
TCCCACCTCC AGAAAGTCTC CTCCTGACAG CTGCTGCCTC TTGTCTCTGT CTCCAGCCCT 180
GGCCTTTGCT GATCTCCTCA AGTCGGCCTT TAACAACCAA TTATCAGTCC TAGTCTTACT 240
TGACTCCCCC AGACTCCAGA TCAGGAGAAC CTCAAGGCAA GGACGGGGAT TGGTTCTTAC 300
ACATCTCCCC TCCTTCCTCG TGACTGACTG GTGCTAATGC TGGATGCGCT ACATCCAGCA 360
CCCCCATCCC ACTCCCCAAA GCCCTGGTGG TATCCGGGCC CTAGGCAGTG CACCCATCCC 420
CCTCCTCCAA AAACCAGGCT GCTCAGACCC GCGGTACAAA GGTCGGCCTT CCAGGGATGA 480
GTACAACTTG GGTCCACCTG CAGGTGCCTT TTGTGATACC ACGGTCACTA GATTCCAGAC 540
GTTCCCATCC CCGGCCGCAT GCGCCATCCC AAAAGGAGGA GGCCGGCTTC CAGGGAATGC 600
CAGGTGGAAC TCGGGGTTTG TGGGGTGGAG GGCCCAAAGC CCAGGCTCCA TCCAAGGGCC 660
TGACGTCACC CAAATCCCGG GCTCCCTCTG CGGGGACAGA GGAAAGAGGA AACAGGAATG 720
GGGAGGAGGA TTTAGGGGTG TACAAAGAGC GCTTACCACC CCAAGCAGGA AAGGTCACCT 780
CGACTCCCCA CCTCTCCAGA AGCTCGACCT 810