EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-23178

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr9:53634040-53635110

Target genes

Number: 5
Name	Ensembl ID

Acat1	ENSMUSG00000032047
Rab39	ENSMUSG00000055069
Slc35f2	ENSMUSG00000042195
Sln	ENSMUSG00000042045
Gm16380	ENSMUSG00000059830

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NFYA	MA0060.3	chr9:53634838-53634849	AACCAATCAGA	+	6.62
NFYB	MA0502.1	chr9:53634833-53634848	ACACCAACCAATCAG	+	6.97

Enhancer Sequence

TGTCTGTGTG TTAGTATGTG TGTGTGTATG TGTGTGTGAG TGTGTGTGGT GTGTGTTAGT 60
ATGTGTGTGT ATATATGTAT GTGTGAGTGT GTGTGGTGTG TGTTAGTATG TGTGTGTGTA 120
TGTATGTATG TGTGAGTGTG TGGTGTGTGT GGTGTGTTAG TATGTGTGTG TATATGTGTG 180
TGTGTGGTGT GTTATGTGTG TTGTGTGTGT GTGTTGTATG TTGTGTGTGT GTATGCACAC 240
TCACATATCA GCTTTACATT GATGCTGTTT TCCTTCCTGT CTGTTAGTAA AAGTTCTCTT 300
GAAAGGTTTG AGAGCACAGG GATGAGGGAG CTGGTGGGAT CAGTGCCAGG TGACCTTGAC 360
TTAAGGGAGG AGTGTGACAG TTTTTCTAGT AGGAGGCTAG TGGGTGTGGA AAGGTTGGAC 420
AAGACCCAGT GACTCACAGG AAATCGCCCC AGCGCCTCCC AGTTCCCTCA CTGGGCCCTG 480
TCCCACGATC TCTGAGATCT GGTTCTCACC TCTGCTGTCC TCAAACGCCT GGCTGGCATT 540
TGATGAACAT GGTAGATGGA TTCTTGGGGA CTGCCGGCTC GCCACTGGCA TGGGAAAAAT 600
AGTGTATTGC TTTGCAGAGT CAAAGAGGGC CGCACTGCCA AACCACAGCC AGGCCATAGA 660
GACGGCTGTA ACTGGGAACC CAAACCACAC TGGAGCTCCG GCTTGTGGCC CCGCCTTCAC 720
TGTGGGCTTC TTGCTTCTGA CTTCAGGCCA GACGATTGTC TTTATTGGAA GAACGCATTC 780
TACAGTGTAA ACCACACCAA CCAATCAGAG GGGAAGGACT TTTGTTTTGA TAATCTATAA 840
GTAGGTAAAA TTAGGTATTG AAAAAAATAG TCTTTCAAAC CCTTTTAATT AAGCCTTGCC 900
TGGCAGGCAG TGTTAAGAGC TACACTTTTT ATGGGCTGTG GCTTCCTGGC TGCCTGTTGA 960
GAACAGAGTT AGTCTGCCCT CAGTTCTTCT GCCAGATGCT GGGCAGAGGC GGCCGCCTTG 1020
TGGATTGTCT CTGCGCAGGA AACTCTTAGA GGTCAGGCTT GAAAGAGCAG 1070