EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-23065

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr9:45484800-45486590

Target genes

Number: 10
Name	Ensembl ID

Fxyd2	ENSMUSG00000059412
Bace1	ENSMUSG00000032086
Gm16536	ENSMUSG00000089810
Pcsk7	ENSMUSG00000035382
Rnf214	ENSMUSG00000042790
Tagln	ENSMUSG00000032085
Sidt2	ENSMUSG00000034908
Pafah1b2	ENSMUSG00000003131
Sik3	ENSMUSG00000034135
Zfp259	ENSMUSG00000032078

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TP53	MA0106.3	chr9:45485177-45485195	TGCATGCCCAGGCATGTG	-	6.59
TP53	MA0106.3	chr9:45485177-45485195	TGCATGCCCAGGCATGTG	+	6.84

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_04438	chr9:45483461-45487528	E14.5_Brain
mSE_11119	chr9:45484059-45485439	Olfactory_bulb

Enhancer Sequence

TCGCTCCTAA TGAATTGAAT CTGATGCATT CAGGCTCAGC GACTCGGTGG ACCTGTAGTG 60
ATAGTAGAGT GACAGTATCT CCCAGCCCGA GGAGGGGGGG TGGAGAGTGT GTGCATGTGT 120
GACTGTGTGT GTGTGTGTGT ATGTGTGTGT GTAACTATGT GTGTGTACAT GTGTGTCTGT 180
ATGTGCATGT GTGACTATGT GTGTGTGTGT GCATGTGTAA CTGTGTGTGT ATATGTATGT 240
GTGCTCATGT GTGACTGTGT GTGTGTGTGC AGCTGTGGCT ATGTGTGTGC GCCTGTATGT 300
CTGTTTGTAT GTGTGTACAT GTTTGTCTCT GTCTGTCTGT GTCTATCTAT ATGTATGTGT 360
CCGTTTGTCT GTCTGTCTGC ATGCCCAGGC ATGTGTGTCT GTCTGTCTGT GGGTGGGTCT 420
GTGTATCTGT GTGTCTGTCT ATCAATGTGT GATACAGGCT TGTGTGCAAA CCTTCCTGCT 480
CTCCCTTATC ACCATTTGGG AAAAAAAAAA AAAGACCAGT ATGCAGCTAT AGGAGGGGTA 540
AGGTCCCCTG TTTCCTCTCG AGCAGACACT CACGTAAAGG CCTGGAAGCC AGTTCCCCCA 600
CCTCTCTGAA AGCTCAGCTC CTCCACCCCA CCCTCTCCGC TCGCCTCCCC CACCTCATTA 660
GAATGCACTT TTGCAGAAGA GCCCATCAAA GCTGATTATG ATCACGCTGC TTGATTAGCG 720
GCTGTGCTCT TCCAAGAGCT CCCCAAGGAG GGGGGAGGAG GAGGCGCCCC TGGACATGGC 780
AAGGGGCCCA GGCTCCAGGG GGGGAAGGGG TGAGTGCAGG GGTGTGGACT CCGGACCCTA 840
TGGCTACTGG ACATTGGAAG GTGCATCAAG TCAGAGGGGC AGACTGGAAC AGAGTGCAGA 900
AAAGGCTCAG ATGGAGCAAG ACAGGAACCG GAAGCTCGCA ACAGTGTATC AAGTTCCCTC 960
CCCAACCCCC ACTTCTCTGT GGGTGCCAAG ACTGGTGGAC CAGATGTGGC CAAACCAATG 1020
CTGCTTCGTG AGCTGGAAAA ACAACTGCTG AGTCGGTTCC TTCTGAGGAC TGCTTGTCTG 1080
CTAATGAAAT TTTCAATCAG TGAGCCAAGA TCAGAATATA CCCGACATGC ATATACACAC 1140
ACGTGTGCAG TGATGTGTGA GGTGCACACA TGTGTACAAA CTACACCCAC GATCAAGTGT 1200
CAAAGGGGCA CAGTAGCCCG CCCGTGATGG GGCAGATTCA TACACATGCA TGTGAACGGT 1260
TATGTGTTCA TAAATGCCTT CTCTAGTAAA AGGACATCCC TGACCCATGA AAGGCAGCTA 1320
CGGGTGGTTA TATGGAACAC TGCTCAAGAG TTCCTGCCAG GGAAGCCCAG CCAGGCAGGA 1380
GGCAGAGGGG CAAAGGGATG CTTTGAGGAA TTCCTGGGCT TGGCACATGC AGCACTGAAT 1440
GACAAGGGGA ACCAGCTGCA GGGGACAGCA TTTGTCTCTG GGGCTCGGGA CAGATCCTTG 1500
GCAGGATACT AAGAGGAGCC CACACAGAGC CAACCTAGAT TTGGGGACTT TTGAATCCTC 1560
AGCAGCTGAG AAATAAAAGC ATCTCCGGAT GCAAAGACTG AATGTTTGAT TAACCAAGGG 1620
CAGGGTGCAC AACTGGGGCC TCTTGCCACG GTTCTGTAGG GGAAATGTCT CCACCTTACA 1680
TCCGAGTCTC CGAGAGCCTC TACAGCTAGA CTGAGGGCCA GAGGCACACT CTGACTGGAG 1740
TGAGGCCATG CCAAGTCCCC ATAGAAAGCA AGCCAGCAGA AGAGGGCACT 1790