EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-23025

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr9:44095070-44095290

Target genes

Number: 26
Name	Ensembl ID

Usp2	ENSMUSG00000032010
C1qtnf5	ENSMUSG00000079592
Rnf26	ENSMUSG00000053128
Mcam	ENSMUSG00000032135
Cbl	ENSMUSG00000034342
Pdzd3	ENSMUSG00000032105
Nlrx1	ENSMUSG00000032109
Abcg4	ENSMUSG00000032131
Hinfp	ENSMUSG00000032119
C2cd2l	ENSMUSG00000032120
Dpagt1	ENSMUSG00000032123
H2afx	ENSMUSG00000049932
Hmbs	ENSMUSG00000032126
Vps11	ENSMUSG00000032127
Gm10080	ENSMUSG00000060467
Hyou1	ENSMUSG00000032115
Slc37a4	ENSMUSG00000032114
Trappc4	ENSMUSG00000032112
Rps25	ENSMUSG00000009927
Ccdc84	ENSMUSG00000043923
C030014I23Rik	ENSMUSG00000060380
Bcl9l	ENSMUSG00000063382
Ddx6	ENSMUSG00000032097
Phldb1	ENSMUSG00000048537
Arcn1	ENSMUSG00000032096
Atp5l	ENSMUSG00000038717

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA

MA0729.1

chr9:44095090-44095108

GAGGTCATAGGGTCTATT

6.57

Enhancer Sequence

GAGAGAGACT GAGAGATTGA GAGGTCATAG GGTCTATTTA GAAGAAAAAG CTTCAATAGC 60
TGTTTGAACT CCCATAGTGC TGGCAGATGT GGGGAGCAGG GATCTTGTAC CTCAACTGCA 120
GTTGTGCAGT GAGGGTTAGG GCCCACAAAG CTCGCAGAGT AGGGTATCCC CAGGACTTAT 180
GCTCCTGGAA AGGCAACTCA GGGAGAGTCC CATGGGGCTG 220