EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-22748

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr9:21001620-21003030

Target genes

Number: 31
Name	Ensembl ID

Pin1	ENSMUSG00000032171
Angptl6	ENSMUSG00000038742
Ppan	ENSMUSG00000004100
Eif3g	ENSMUSG00000070319
Dnmt1	ENSMUSG00000004099
S1pr2	ENSMUSG00000043895
Mrpl4	ENSMUSG00000003299
Icam1	ENSMUSG00000037405
Icam4	ENSMUSG00000001014
Zglp1	ENSMUSG00000079681
Fdx1l	ENSMUSG00000079677
1700084C06Rik	ENSMUSG00000086016
Raver1	ENSMUSG00000010205
Tyk2	ENSMUSG00000032175
Cdc37	ENSMUSG00000019471
Pde4a	ENSMUSG00000032177
Keap1	ENSMUSG00000003308
S1pr5	ENSMUSG00000045087
Atg4d	ENSMUSG00000002820
Kri1	ENSMUSG00000035047
Ap1m2	ENSMUSG00000003309
Slc44a2	ENSMUSG00000057193
Ilf3	ENSMUSG00000032178
Qtrt1	ENSMUSG00000002825
Dnm2	ENSMUSG00000033335
Tmed1	ENSMUSG00000032180
AB124611	ENSMUSG00000057191
Carm1	ENSMUSG00000032185
1810026J23Rik	ENSMUSG00000048429
Smarca4	ENSMUSG00000032187
Spc24	ENSMUSG00000074476

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)	MA0730.1	chr9:21001742-21001759	TGGCCTCTGTGTGACCC	-	6.13
Rarb(var.2)	MA0858.1	chr9:21001742-21001759	TGGCCTCTGTGTGACCC	-	6.13

Enhancer Sequence

AGGTAGGACG GTGCAGGGTC AGGGGTGGGG GTGACACCGT CCATCAGGGA CCTCTGATCT 60
TATGGGATAG GCACTTGTCT TCAGCTGTGT TCATGTGTGG CTGGGCCATA TAACATGCTT 120
TGTGGCCTCT GTGTGACCCC AGGGTTGGGC GTGGATGGCA GTGTCTGTGT GTGAGTGTGT 180
GTTTGGGAGT CTCACTGGGG AAGGTGTCTT TCTGATTGGG TGTGACTGGC CTGTATCTGG 240
ACATGCATGT GTCTGCAATG GCTGGGTGTC CTGCCTGGTA CTGAAGTGGA CCAGCTGTTG 300
TGTGTTGGGA TGTATTTGTT AAATGCAGTG CTACTTGATG TATCTGGGGG TATGTGACCC 360
CCAAATGTCA ATGACTGACG TATTGGGGTG TGTACCTTTG GCTGGTCTGA GCATCTGAGC 420
TTTGTGGCGC TAGATAGACT GAAGGCAATT GGGAGTATGT GCAGTTGTGA GTGTGTATGT 480
GTGTCTGTGT CCAGGGTCTC TGGGTAGTAT AGAAGAAAGG GACACCCCAA TCTTCAGTGT 540
GGCTCACCCC CTCCATCTGC CGCCCCCTAC CTTGCCCATA CAAGAGTGTG TTCCTGCTAT 600
GGGGTGCTGG GGGTGGGGAG CAAATGCCCT TTCTGCTCCA AGCCCAATGT CACAGAAGAT 660
GCCTATGTGA AAGGACATGG GGGGACCAGG AGGGGACCCC CCAAACCCAC TCGGGGACAT 720
ATTCCACCCA TCTGTATGTT ATCTACCTCT CTGAGAATGG AGGAGAGGGG AGTTTGCCGG 780
GACCCCCTCC CCCAGGTGAT GGGATATAAT TTCCTAGGCT CACTCCGTTC TGGTGTCTAG 840
CCAAACCCTC TGCTCCTCTC CCAGAGCTTG GATGCTATTA AACCTTGCAG ATGGGGCTGG 900
GCTTGGTGAA CAGACCCTTA TCCTTCCCCT CCCACCTGCA CCCCGGAATT GAGGTCATGT 960
TTGGCAACAC CTAGGCCAGG CTTGGGGTAG CTCTGGGAAG GCAAGGGTTA AGGGGCCTCA 1020
GGCTTGCCCC CCTTTCCTGG GCTCAGCAGC TGGTTGGAAG GGGAGTTGCT AAGGAGACTC 1080
CCATCACCAT GGCGACCGGA GTCTCCTGGT GTGCTATTGG TTCTGTGGTC AACAGGAGCC 1140
CCTCCCTTCC ACAGGTGCTC CTTGCATTAC TCTTTTTTTT GGGGGGGTCC TTTCCCTTTA 1200
CTGGGAATCC CCCCTCCCAA GCTGAGGAAA GCCCCTCCTC CAGAGCCAAC AGGACAGGAA 1260
GAGCTAATAG CACTCGTCAG ACACTCTAAT TGGGGCTCTG AGTAGAGAAA CTGTGGGCCC 1320
ACAGGAATTT GCTGGGAAGG GCTCTCATAT ATATATGTCT ATATGTACCC CACAATGGTC 1380
CCTATCACCC ATTCTTTTTT GGCTCCTTCT 1410