EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-22730

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr9:20795160-20796020

Target genes

Number: 31
Name	Ensembl ID

Zfp266	ENSMUSG00000060510
5730577I03Rik	ENSMUSG00000062470
Ubl5	ENSMUSG00000084786
Pin1	ENSMUSG00000032171
Olfm2	ENSMUSG00000032172
A230050P20Rik	ENSMUSG00000038884
Angptl6	ENSMUSG00000038742
Ppan	ENSMUSG00000004100
Eif3g	ENSMUSG00000070319
Dnmt1	ENSMUSG00000004099
S1pr2	ENSMUSG00000043895
Mrpl4	ENSMUSG00000003299
Icam1	ENSMUSG00000037405
Icam4	ENSMUSG00000001014
Zglp1	ENSMUSG00000079681
Fdx1l	ENSMUSG00000079677
1700084C06Rik	ENSMUSG00000086016
Raver1	ENSMUSG00000010205
Tyk2	ENSMUSG00000032175
Cdc37	ENSMUSG00000019471
Pde4a	ENSMUSG00000032177
Keap1	ENSMUSG00000003308
S1pr5	ENSMUSG00000045087
Atg4d	ENSMUSG00000002820
Slc44a2	ENSMUSG00000057193
Ilf3	ENSMUSG00000032178
Qtrt1	ENSMUSG00000002825
Dnm2	ENSMUSG00000033335
Tmed1	ENSMUSG00000032180
Carm1	ENSMUSG00000032185
1810026J23Rik	ENSMUSG00000048429

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HSF1	MA0486.2	chr9:20795213-20795226	GAAAATTCCAGAA	-	6.17
HSF2	MA0770.1	chr9:20795213-20795226	GAAAATTCCAGAA	-	6.2
HSF4	MA0771.1	chr9:20795213-20795226	GAAAATTCCAGAA	-	6.17
KLF13	MA0657.1	chr9:20795497-20795515	CAGAGGTGGGCGTGGCTT	-	6.67
KLF14	MA0740.1	chr9:20795500-20795514	AGGTGGGCGTGGCT	-	6.71
SP1	MA0079.4	chr9:20795501-20795516	GGTGGGCGTGGCTTC	-	7.51
SP3	MA0746.2	chr9:20795501-20795514	GGTGGGCGTGGCT	-	6.78
SP4	MA0685.1	chr9:20795499-20795516	GAGGTGGGCGTGGCTTC	-	7.41
SP8	MA0747.1	chr9:20795501-20795513	GGTGGGCGTGGC	-	6.62

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_05707	chr9:20795203-20796009	E14.5_Limb
mSE_10188	chr9:20795069-20796588	Embryonic_stem_cells

Enhancer Sequence

GATATCAGAG GTAGGAGAAT ATTTGTGAAT TGTAGGGCAG GCTGGTCTTC ATAGAAAATT 60
CCAGAACAGT CAGGAATAGA GAGCCACTGT CTAAAAAAAA AAAAAGGAGC ATATCTGATT 120
TTTTTTTTAA TCAAAAAAGT AATTCCAAGA CATCATTGGC TAAAATGTAA TGAAAATCCT 180
CGAGAGAAAT GAAGCACGGA CGGCAGTGAG AGCTGTGGCG GGAAGGGAAA GGGATGTCAG 240
TCAAGCTGGC CAGGCTCCAG CCTTTAGGGA GCTTTAGAGT GGAACCGGTC CAGGTGGAAA 300
GAACTTACTG CAAACACTAA GGTGGAAATG TTAGCGGCAG AGGTGGGCGT GGCTTCAGCC 360
AGGAATGCTG GCGCTAGAGA GAGGGAGGAG GCAGGGCCTG GCCGGGGGCT GCAAAAGGAG 420
CATTCACCAG GGTAAGGGAG GTTCAGGGTG AGAAAGGAGG CGAGAGAGGC TCAGCAGGGG 480
AGGCTTTGTG AGTGGCCCTT TCCTGGATTA GAAAGCCAGG GAGATGGCTC AGTGAGTAAA 540
ATGGTCGCCA AGCAAAACTG AGGACCTGTG TCTGGATCCC CAGGAATCAC ACAAATGTGA 600
AGTGGGCATG GAGACCTCAG AAAGCAGAGA CAGAGCATCC CCAGGGCAGT CTGGCTAGGG 660
AGACGAAGCA TATCAAGATA CTGTGGCTTT GATTGACAGA CTCTGCTCAC GATGTAAGGT 720
AGAGCCGGGC AGTGGTGGTG CACGCCTTTG ATCCCGGCAC TTGGGAGACA GAGGCAGGTG 780
GGTTTCTGAG TTCGAGGCCA GCTTGGTCTA CAGATTGAGT TCCAGAACAG CCAGAACACA 840
GAGGAAACCC TGTCACAAAA 860