EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-22583

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr8:126206220-126206700

Target genes

Number: 18
Name	Ensembl ID

Rpl13	ENSMUSG00000000740
Chmp1a	ENSMUSG00000000743
Cdk10	ENSMUSG00000033862
1300018I17Rik	ENSMUSG00000001062
Fanca	ENSMUSG00000032815
Spire2	ENSMUSG00000010154
Tcf25	ENSMUSG00000001472
Def8	ENSMUSG00000001482
Afg3l1	ENSMUSG00000031967
Dbndd1	ENSMUSG00000031970
Gas8	ENSMUSG00000040220
7SK	ENSMUSG00000088632
Rhou	ENSMUSG00000039960
Rab4a	ENSMUSG00000019478
1700054N08Rik	ENSMUSG00000031971
Nup133	ENSMUSG00000039509
Abcb10	ENSMUSG00000031974
Taf5l	ENSMUSG00000038697

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr8:126206422-126206437	TAAGCCCCGCCCACA	+	6.97
SP2	MA0516.2	chr8:126206421-126206438	TTAAGCCCCGCCCACAG	+	7.09
SP4	MA0685.1	chr8:126206422-126206439	TAAGCCCCGCCCACAGG	+	6.26

Enhancer Sequence

CTAGCCAACA ACTGCAGCTA CAGGGCCTGC ATGGCTCGCC AATGAAGGGC CACTTCTTAT 60
TCACATTATA CACTCCTTGC AAGGTGAACG AACGCACTGC TCTGTGATGC TGTTGCCTCC 120
CGGGTTCAGT TCTCCAGCAG CCATTGAACA CTCACCATGA CCTTGGGAAG CGAGTGCATA 180
TCCAACAAAG CTGCTCTATG TTTAAGCCCC GCCCACAGGC TCATCCCCTC CCACAGGGCT 240
CAGCTTCACC CATAGACTCC GCCCCGCCCA CGTGTCTCAG CCCCACCCAC GGGGCTCCGC 300
CCCGCCCACA GGGCCCAGGG ACAGCAACCC TCCGGAGAAA GGATTCCATT GAGGCAAATG 360
AAGGAAGATC CGGATGCCTG GCCTCAGAGA GCTACCCTCT GTGCAAGGGG CTACCTGCTA 420
AAGTTAGGTC CGTTTCTCCC TCCCAGCCCC AGGCTCCAAG GAATAAGACT CAGACTTAAA 480