EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-22552

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr8:125262010-125264020

Target genes

Number: 21
Name	Ensembl ID

RP23	ENSMUSG00000093682
Zc3h18	ENSMUSG00000017478
Cyba	ENSMUSG00000006519
Mvd	ENSMUSG00000006517
Rnf166	ENSMUSG00000014470
Ctu2	ENSMUSG00000049482
Fam38a	ENSMUSG00000014444
Cdt1	ENSMUSG00000006585
Aprt	ENSMUSG00000006589
Galns	ENSMUSG00000015027
Trappc2l	ENSMUSG00000015013
Gm15899	ENSMUSG00000085917
Cbfa2t3	ENSMUSG00000006362
Acsf3	ENSMUSG00000015016
Cdh15	ENSMUSG00000031962
Ankrd11	ENSMUSG00000035569
Spg7	ENSMUSG00000000738
Rpl13	ENSMUSG00000000740
Chmp1a	ENSMUSG00000000743
Cdk10	ENSMUSG00000033862
Fanca	ENSMUSG00000032815

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EGR2	MA0472.2	chr8:125263409-125263420	CCGCCCACGCA	+	6.32
ZNF263	MA0528.1	chr8:125262826-125262847	GAGGGATGGAGGGAGGGAGAG	+	6.36
ZNF263	MA0528.1	chr8:125262830-125262851	GATGGAGGGAGGGAGAGAGAG	+	6.5
ZNF263	MA0528.1	chr8:125262834-125262855	GAGGGAGGGAGAGAGAGAGAG	+	6.89
ZNF740	MA0753.2	chr8:125262803-125262816	GGGGGGGGGGGGG	-	6.03

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_04589

chr8:125261364-125264163

E14.5_Brain

Enhancer Sequence

AGCCATCATC AGCGTTTAAC CCTCTGTGTG CTGGACTCCT CTGCTCCAGG AAGGGGGCTC 60
CAGGCCTTGG GAGGGCCTCC TCATCCACCA GCAAGAGGAA TCCTCAACAC TGAGAGTCTA 120
CTGAAATCTC TGGATGAAAA CACTGCCTAT GCACTGGGCC TGGCCTGGGG CAGGGCGGGG 180
GAGGGCAAGA CTGGAGGCTC AGCCCAATCC AGATCCAGTT CACAACCTTA ACTGATGAAG 240
TCTCAATGAG ACCGTAGGTT CTGGTGGGGA TAGGTGCATA CACGCCTACA GGTCCAGTGC 300
CACTGTGCAG GCTACCTCTG AGCCTGACTC GTGGTGGATA GGCAAGGTGG GGCCTGGTAT 360
CTTCCTCCTG TGAGAGAAGG GCTACAGCAA CTACCATCCT CCCAGGGTCC ATGTGCCTCC 420
CAACAGCCCA CAGCAGAGCT GTGGGTAATG GCCCCATAGC AGAGCCTGTG GGTAACGGCC 480
CCCACAGCAG AGCCTGTGGG TAACGGCCCC ACAGCAGAGC CTGTGGGTAA CGGCCCCACA 540
GCAGAGCCTG TGGGTAACGG CCCCCATAGC AGAGCCGGTG GGTAACGGCC CCCACAGCAG 600
AGCTGTTCTC CTCTTTAAGG CCCAGTGCAT TCCATGCACC AAGGCTGCAT GCGTCCCATC 660
CACTCACTGT GCATTAGAAC TGCTTCTTTC AAGAGAAGCA GACGGTGCAC TTCCTGGAGA 720
GGTTCTGAGA GGTGGGGCTG GAGTCCTGCC CAGCTCCTGG AGTCCAGACC CTATACTGAA 780
GGTCTTAGAA ACCGGGGGGG GGGGGGTGTA AGGAGAGAGG GATGGAGGGA GGGAGAGAGA 840
GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGGATCCCT GAGGGTCAGC 900
CAGCCTGACC ACGGGCATAA CGCCTGGATG TGTGCCTAAG TCTCAGGGGT CTCCTCACCT 960
CATCTAGGGA TGGGCAATAC TTGGCCCCTC GAGATTTCTG TGTGTCACAG CCCAGGCAGC 1020
AGGTGTCTGG GATGGGTCTC TGCCTTCCCA CAGCTTCCCC CCCCCCTCCG CCACTCCCCT 1080
CCCTGTCCCT TTACTCTGGT TCTTCTGTAT TGGGTAGCAG GGAACACCTG TTCAACTCAG 1140
CCAGCCCACA CCAGGACAGA GCAGAAGGCC AACTCCCACC TGGCCTCCCT GAAGGAGTAG 1200
ATTGGTCGGG GGATGGGGGC AGGGCAGGAT TCCCACCGGA GCCAAGGCTG GTCCCCAGGT 1260
TGTTGTTTTC ACGTTGGATT TTTGCTACCT GTCAGACCTG GGATTTTTAA TGACAGTGAA 1320
ATGAAGCTGC TTCACAGATG TGAGGTGACA GGCAGCTGCA GGAGGTAGAC AAATTACCTC 1380
CAGACCCAGC CCACAACGCC CGCCCACGCA GCCACACAAA GGAAGCCAGC CTGCCTCACT 1440
TGGATGAGCA GAAGCAGCAG GGGGCCTGAG AAGCCAGTTC CAGCTTCCCC AAGGCTCCTG 1500
CCCTGCCACG GGCAGCGCCT GCCCCCTATA CAATAAGGGC AGCCTGGCTA CAGCCTTCTG 1560
GCCCTGGCCC TCAGAGTTCA AATGCACAAC GAGGTTCTCT CCTAGACACA GCGGTGTCTC 1620
CTGCTCAAAG ATCAGCTCCC CATCCGTTAG CCATCCGTCT CAGGAGTCCG GGATGAGCAT 1680
CTGCTGCGGT GGGAGAAGGA AGAGCCCTAG AAACCCTAGG GTATGGGGTT CAGGGTCAAA 1740
AACAGAGAGC CAGAGAATCG GGAACCTCTG GGAGAGAGGG AGACCACAGA CGGAAGGAAG 1800
CCGGAGAAGA CAGCTGGAAC CAACTTTCTC TCAGCTGGGC TTGGCTAGGT GTGAGGTGTG 1860
GAGGGAGCTC CTTCTCCTCC CCTGGAGCTC TGAGACCCTA GGTGGTTGAG AACTTTGGCG 1920
GAGAGGCCCA TGGAGGGAGT CTGGACTCTA GACCTGCATT GACTGTACAC CTGCCACATT 1980
GACAAAGAAG GCCTCAGACT TTAGTTCATT 2010