EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-22188

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr8:107676140-107677600

Target genes

Number: 19
Name	Ensembl ID

Cbfb	ENSMUSG00000031885
D230025D16Rik	ENSMUSG00000031889
B3gnt9	ENSMUSG00000069920
Tradd	ENSMUSG00000031887
Fbxl8	ENSMUSG00000033313
4931428F04Rik	ENSMUSG00000014837
Exoc3l	ENSMUSG00000043251
E2f4	ENSMUSG00000014859
Elmo3	ENSMUSG00000014791
Lrrc29	ENSMUSG00000041679
Tmem208	ENSMUSG00000014856
Fhod1	ENSMUSG00000014778
Slc9a5	ENSMUSG00000014786
Tppp3	ENSMUSG00000014846
Zdhhc1	ENSMUSG00000039199
Hsd11b2	ENSMUSG00000031891
Atp6v0d1	ENSMUSG00000013160
Gm8841	ENSMUSG00000091957
Acd	ENSMUSG00000038000

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr8:107676418-107676439	CTTTATTTTCTCTTTCAATAT	+	6.21
Nr5a2	MA0505.1	chr8:107676349-107676364	TCTGGCCTTGAACTC	-	7.28
Zfx	MA0146.2	chr8:107677170-107677184	GGCGCCTGGGCCTG	+	6.41

Enhancer Sequence

AGCATGTGTG ACTTCAGAAG AGGGCATCGG ATCACTGAAA CTGCAATTAC AGATGTTTGC 60
AGCCACCATG TGGGTGCTGG GGATTAAACC TGCGTCCTCT GCAAGAGAAA AAACGTGCCC 120
TTAAGCATTG AGCCACCTCT CCAGCACCTA TTATTTATCC TGTTCTTCAC ATAGGGTCTC 180
ATATTGTAAT CCAATATGAG AGCGCTGGGT CTGGCCTTGA ACTCTTAACA ATCCGGCCTC 240
CAAGGTGCGG GATTGCACAC CTGAGTCTCT ACTCGCAACT TTATTTTCTC TTTCAATATT 300
CCTCTGTAGG CCTGTTCACC TAGGCCTAAA GAAGGGTGTT TATCCTCCAA ATTAGAGGAA 360
GTACCGCTGA GCGCATAAAT AAGAGCTCAG ACTCCAACCT GGCTGTGGCT GACAGAATAA 420
TAAAGGCTCC GGGAAACTCT AGGACCTTCG ACCTCCCCTG GGGTTCCAGC ATAGAATACC 480
AATGGGCAAC CTGGAAGGGA GCCAGGTGGA TAGCTGGCTC CTTACTCTCC TCATCCCTCC 540
AAGAAGGTGC AGTCTTCCAC CAGCCCCTTC CCACACCGCA CACTCTGCCT ACGTTCTCTT 600
GTCTCTTTAC CTTTGCTGGC CAACCCCGGA GGGGTGGTGA ACCCTTTACA GATACAAGCC 660
ACCGCCTCCG CTCGAAGGCA TTTCCAAAGC CCAACTTGGG GCTGGAGCCT GGCTTCTGGC 720
TTCCGGCTCT GGAGGCAGCG CCCCCTTTTT CTCCGACACC TTTACACTCA AAGGAGCAAT 780
TAACAGCCAA GCAGGCTGGG AAAGGACCAA TTAGTGTTCC ACCAGTCCCG CTGACCGCTG 840
GCCCCGCAGC ACCGCAACTG ACTCCTCCTC TCGCATCAGG CTCCGGCAAT CAGGAGCGGA 900
TCTTAGCCTT CACGGCACAC CGACAGTGCC AGCTGCCTGG GAGCTCCGAG GGACCAGCCA 960
TCTGGCCTCA TGCCAACTGC AGTGATGGAT CCGGTCGCTG GCTACTGTCC AGAGCCAGAG 1020
CGGACTCCAG GGCGCCTGGG CCTGGAACTT AACAGCGGCT GACTGGTGGC AGAGCAAGAG 1080
GGTTGGACGC CACTGGGAGG ACTCCTTAGC CTCCCACCTC TTGTGCCTTG GAGCCAGTCA 1140
TCAATTCATC CTGCAGCAGC TAGAACACTG GGACCATACA ACCACAGTCC TAGAATTGCC 1200
ACTGAGACAC CTGGTGTATT CTAGCTTTTT CAGGACCCTC ATCATTTCTC TGGGTCTGGG 1260
TTAGCAGTGT GCAAATCAGT TCCCTGATGG TGACCATGGC AGAACCAGGC TTTGAAAACC 1320
CACAGTACGT TCTTGTTCTT GCTCTTCCTG CAGTAAAGAA GGCAGAAAGG AGCTCAATCA 1380
AGGTCTTCAA CACTACTAAA TGAATGTATA GACTTCCTTC CCTAGGTCCT TTGCCCTGAA 1440
TATATATACG TATACGTATA 1460