EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-21929

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr8:86549730-86550090

Target genes

Number: 22
Name	Ensembl ID

Tecr	ENSMUSG00000031708
Gipc1	ENSMUSG00000019433
Pkn1	ENSMUSG00000057672
Ddx39	ENSMUSG00000005481
Lphn1	ENSMUSG00000013033
Gm10644	ENSMUSG00000074219
Asf1b	ENSMUSG00000005470
Prkaca	ENSMUSG00000005469
Samd1	ENSMUSG00000079003
1700067K01Rik	ENSMUSG00000046408
2210011C24Rik	ENSMUSG00000074217
Palm3	ENSMUSG00000047986
Gm10643	ENSMUSG00000074215
Rfx1	ENSMUSG00000031706
C330011M18Rik	ENSMUSG00000056753
Dcaf15	ENSMUSG00000037103
Cc2d1a	ENSMUSG00000036686
Nanos3	ENSMUSG00000056155
Zswim4	ENSMUSG00000035671
D8Ertd738e	ENSMUSG00000019362
Mri1	ENSMUSG00000004996
Ccdc130	ENSMUSG00000004994

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr8:86549948-86549958	GCCCCGCCCC	+	6.02
KLF5	MA0599.1	chr8:86549953-86549963	GCCCCGCCCC	+	6.02
MAFF	MA0495.3	chr8:86549968-86549983	CTGCTGAGTCAGCGC	+	7.03
MAFF	MA0495.3	chr8:86549968-86549983	CTGCTGAGTCAGCGC	-	7.04

Enhancer Sequence

CCCTTTCTAG TCCAAGCTGG CCTGGAACTC ATGGAGATCG TCCTACTGAG TCTTGGGGTT 60
ACCAAGCGCG TTCGCCTCGC CTGGCCATTC TCCTTCCTAT CTTAGAAGTG CAAAACCCTA 120
GTCCCCATCT CTAGGCCCCG CCTCCACGCC CCCATTTGCG GACCACCATT GGGCGTGGGC 180
CTGGCTTCCG CAGCATGAGG GCGCGGCCGC CTGGTCCTGC CCCGCCCCGC CCCTCTCGCT 240
GCTGAGTCAG CGCTCTGCAG CCCCCGCCCG CGGGAGGACG CCCCGGGAGT CCCGGGAGCC 300
CCGAGGAGGC GGGCGGAGGG CGGCCCTGGA CTAGCCCGCA GCTCTGGGTC GTGTGTGCGC 360