EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-21928

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr8:86500990-86502420

Target genes

Number: 24
Name	Ensembl ID

Ndufb7	ENSMUSG00000033938
Dnajb1	ENSMUSG00000005483
Gipc1	ENSMUSG00000019433
Ptger1	ENSMUSG00000019464
Pkn1	ENSMUSG00000057672
Ddx39	ENSMUSG00000005481
Cd97	ENSMUSG00000002885
Lphn1	ENSMUSG00000013033
Gm10644	ENSMUSG00000074219
Asf1b	ENSMUSG00000005470
Prkaca	ENSMUSG00000005469
Samd1	ENSMUSG00000079003
1700067K01Rik	ENSMUSG00000046408
2210011C24Rik	ENSMUSG00000074217
Palm3	ENSMUSG00000047986
Gm10643	ENSMUSG00000074215
Rfx1	ENSMUSG00000031706
C330011M18Rik	ENSMUSG00000056753
Dcaf15	ENSMUSG00000037103
Cc2d1a	ENSMUSG00000036686
Nanos3	ENSMUSG00000056155
Zswim4	ENSMUSG00000035671
D8Ertd738e	ENSMUSG00000019362
Mri1	ENSMUSG00000004996

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ETV2	MA0762.1	chr8:86501746-86501757	CATTTCCGGTT	-	6.32
MEOX1	MA0661.1	chr8:86501999-86502009	GCTAATTAAC	+	6.02
ZNF263	MA0528.1	chr8:86501160-86501181	TGAGGAAGAAGAACAGGGGGA	+	6.43

Enhancer Sequence

ATGGTGAGGC TGAGCCCTGT TGTTATAGCA ACTTCCTAGA CACTGTCTGC CCCTTAAGTC 60
AGGGAGGGGC TGTGATGGGG GCTGAGGGGA GCAGGTGGAG AGAAGGAGTC TGTGGACCCT 120
TAAGTATCCC TGGAAATGCC TCCATTCCTA AAATCCTGGG CTAGAAAACC TGAGGAAGAA 180
GAACAGGGGG ATGAATGGTC CATTTCAGAC CAAAGCAGAT GGTCTACCCG GAGTAGGGCT 240
CCAGCTGGGA CAGGGGATGG AGTAGTCCCA CCCAGCTTTG GGATTCAGAC CAGAAGAAAG 300
ATAGGTCCAC CTTAGACCTG GGTACAGTAG AGTTTGCTTG ATACCCTGAA CCCTGCCTGG 360
AGATAGAGGG AACCTAGTGT TGGGGGGGTC CCCCTCAAAC TGGGGGTATA GTGCAGTACA 420
CTCTTGCCTG CTGCTGTGAC CCCATATCTG AATCCAAGGT GATTTCCATG TCTTGCCGTG 480
GCACTGGCTT TCCTAGAGGT GTCTGGAGTT TTCGTAGCAC ATCAAATCCA GAGAGTGGAG 540
GCCAATAGCA CCCTTTCCTT TCAAATGAGA GACATGGGCT CTACCGGCTA GCAGCTTAGG 600
CTATCCTCTC TGTCCACTTC CTGTTGGTGG CAGGCGTCCA TGGGTGCCAG GCAGTCCCAG 660
GAAGGCTGCT GCAGAGCCTT TAGCTTTAGG GAGCCTGGAA AGAAGGAAGA TGATGATTAA 720
AGCTACCTTC CCCTCCCCCA CTCAAGTTTA GCCATTCATT TCCGGTTTGA ACATTCATGG 780
CTGAGAACAG AGCCAAGCAC AGGGCAAGGT TTGACGGAGG CCAAGGACAT CCCAGGATAC 840
CGTTCCCCTC TCCGCCCCTG CAGAGGAACA AGACAGAACC AAATGTGCCC ATTTCTCTCA 900
GGGGTAACAG GATTTGGGGT CTCTGTGTTG AGAGGAAACT CAGAGGAGAA GATAAAGTGC 960
CTTTTGCTAC TGTTCTCCAC CCTGGCTCTC CTTCCCGGCT GTTCTTTCAG CTAATTAACA 1020
AGCTCCGGGG CTTTCTTAAC CCTCTGGAGA GCTGGTGCCT GTTGCATGGG CCTGGGCCTT 1080
AACTCCTTCA CCTCTGCCTG TGGGCAGGAC TCTGGGTGCA TGGACCTTGT GCAGACTGTT 1140
TCACTGGGGA GACATTCTGG GAGCCATGGA CATCCTTGGA AGGGCAGGCC AACCAGAGAG 1200
ACACCCTCTC GAGAATCTGC CTACCTCTCA CTGTCAAGGA GAGCCTCTGC AGACCTCGGC 1260
CAGCCTGGAG CAGGTGCCTT TAAATGCTTC CGTGGCAACC AGCTCCTTCC CCAACGCCCA 1320
GACCTTACCA AGAGGCACTT GTTACTCCAG CAAAGAGGAG ATTGCAGATA GAACCCAGGG 1380
CCGCCTGGGA TGGATCTGGG GTCCGAAAGT AGTGAGTGTG AGGACGATGT 1430