EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-21826

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr8:74020280-74020930

Target genes

Number: 23
Name	Ensembl ID

Haus8	ENSMUSG00000035439
Use1	ENSMUSG00000002395
Ocel1	ENSMUSG00000002396
Nr2f6	ENSMUSG00000002393
Ushbp1	ENSMUSG00000034911
5430437P03Rik	ENSMUSG00000031820
Abhd8	ENSMUSG00000007950
Mrpl34	ENSMUSG00000034880
Dda1	ENSMUSG00000074247
Ano8	ENSMUSG00000034863
Gtpbp3	ENSMUSG00000007610
Plvap	ENSMUSG00000034845
Bst2	ENSMUSG00000046718
Fam125a	ENSMUSG00000031813
Tmem221	ENSMUSG00000043664
Nxnl1	ENSMUSG00000034829
Fam129c	ENSMUSG00000043243
Glt25d1	ENSMUSG00000034807
Unc13a	ENSMUSG00000034799
Jak3	ENSMUSG00000031805
Insl3	ENSMUSG00000079019
B3gnt3	ENSMUSG00000031803
Fcho1	ENSMUSG00000070000

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF	MA0139.1	chr8:74020498-74020517	GGCTGACCCCTGGTGGCCT	-	6.2
Sox3	MA0514.1	chr8:74020346-74020356	AAAACAAAGG	-	6.02

Enhancer Sequence

CAATCCTTCT GCCTCCCAAT CATGTTAGCT GAGAGTACAG ATTTGAAACA TGGTGTCTGG 60
GAAGAGAAAA CAAAGGCTGA GTTTGATCAC CATCTGCACC CAGGCCAGTG GCTATCAGAC 120
CTTCAGTCAG GTCGACTTCA TCCCAGAGCT CAGGCGCAGG TCCAGGGCCC GCCCCAATTC 180
CTTGGGGCCT TCATCCCAGC CATCCAGGCA GCCTCCCAGG CTGACCCCTG GTGGCCTGGT 240
TGGCGGGGCT CCAGCCGAGT GCTTCCTGCA GTGACAGGCT CTGGCCCATA TTTCCGGATC 300
CAGGAAATAT CGCCGCTTTG TCCCCAAGGC AGAGTGTGGC ACACAGGCTG TGTGATTCAC 360
CTCCTGCTCC CACAGGGGCC AACGCTGGAG GGAGCAGCCG CCTTCTGCCT TCATGTTTGT 420
CTGCTTTTCC CTCGATGGCT CCAGCTTGCT GCTGGGATTC AAGGACAGCT GGGCTGGACA 480
TTAGAGGGCT GCCCTTGCCC TTCAGTCCCC TGCCTCAGCC TCCCCACCAG GGACAGACCT 540
GTTTCACCAC GCTGGGCTTC ATTCTGTTGC ATGTTGTTTC TGTAAGGGCT ACTATTTTTT 600
TTTTTTTAAA TCTGTACCAA CCTGAGGAGA TGCATCTTTC AATATGTTTG 650