EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-21227

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:148614570-148615210

Target genes

Number: 31
Name	Ensembl ID

Ifitm2	ENSMUSG00000060591
Ifitm1	ENSMUSG00000025491
Pkp3	ENSMUSG00000054065
Sigirr	ENSMUSG00000025494
Ano9	ENSMUSG00000054662
Ptdss2	ENSMUSG00000025495
Rnh1	ENSMUSG00000038650
Hras1	ENSMUSG00000025499
Lrrc56	ENSMUSG00000038637
1600016N20Rik	ENSMUSG00000025500
Rassf7	ENSMUSG00000038618
Phrf1	ENSMUSG00000038611
Irf7	ENSMUSG00000025498
Drd4	ENSMUSG00000025496
Tmem80	ENSMUSG00000025505
Deaf1	ENSMUSG00000058886
Eps8l2	ENSMUSG00000025504
Taldo1	ENSMUSG00000025503
Cend1	ENSMUSG00000060240
Slc25a22	ENSMUSG00000019082
Lrdd	ENSMUSG00000025507
Rplp2	ENSMUSG00000025508
Pnpla2	ENSMUSG00000025509
Efcab4a	ENSMUSG00000048200
Gm10575	ENSMUSG00000073787
Polr2l	ENSMUSG00000038489
Tspan4	ENSMUSG00000025511
Ap2a2	ENSMUSG00000002957
Muc6	ENSMUSG00000048191
Muc2	ENSMUSG00000025515
Tollip	ENSMUSG00000025139

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA(var.2)	MA0730.1	chr7:148614859-148614876	AGGTCATTTGAAGGTCA	+	8.01
Rarb(var.2)	MA0858.1	chr7:148614859-148614876	AGGTCATTTGAAGGTCA	+	7.62

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_03768

chr7:148613690-148625372

Cerebellum

Enhancer Sequence

CACAGCTTTA TCCAACTCAA GGGCAAGAGT TCCTCGCTGG GATCAAGGCT GTGCTACAGG 60
AGCAAAGAGG GTCCCTGACA GCATTGCCTG GGGGTACTGC AGAGTAAAGA CCTCACCTTG 120
AGTCTCTGCA TCCTAGCTGG GGAGACTGGG GCCCGGCCAC CCTGCTGCAC AGAGGCTTCT 180
GTCTGGAAGA CCTAGGGCCA CCTGTCTACC TCCCACCCTG GGAGGACAAA TGGCCTCTGT 240
GCAGAAGCTC AAGCTCCAAG CCCCCCACCA GGCACAGCGG ATACACTGAA GGTCATTTGA 300
AGGTCACACC GTGATGTAGA TAACCAGTGC AGAAACCCAG GTACTGCCCA CCTCCCAGGA 360
AGCTCCTCCA CGCTACATTT CTGGAAAGGC CTTAGCCATT GAACATCAAG TTTACACAGA 420
GCAGTTAACT GCCCTGGGTT ATTTTCTGCT TAACTTACAT CCTATTCTTC CAACTGCCTC 480
CTCTGCCTCC CCAGGGCTGC TAAGCCCAGG GGAGTAAGGA GCTCACGCCA CAACCCCAGT 540
GACCTTCAAG GCCAATGCAC TACTGCTTGG CCACAAGACC CGGCGCCCCC AATTCCACCC 600
TACCTCCCCG TCCTGGCACG CCCTCGGAAG GGCCTGTAGC 640