EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-21211

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:148175930-148177260

Target genes

Number: 28
Name	Ensembl ID

Bet1l	ENSMUSG00000025484
Ric8	ENSMUSG00000025485
Psmd13	ENSMUSG00000025487
Sirt3	ENSMUSG00000025486
Gm15542	ENSMUSG00000083396
Athl1	ENSMUSG00000062031
Ifitm5	ENSMUSG00000025489
Ifitm2	ENSMUSG00000060591
Ifitm1	ENSMUSG00000025491
Ifitm3	ENSMUSG00000025492
B4galnt4	ENSMUSG00000055629
Pkp3	ENSMUSG00000054065
Sigirr	ENSMUSG00000025494
Ptdss2	ENSMUSG00000025495
Rnh1	ENSMUSG00000038650
Hras1	ENSMUSG00000025499
Lrrc56	ENSMUSG00000038637
1600016N20Rik	ENSMUSG00000025500
Rassf7	ENSMUSG00000038618
Phrf1	ENSMUSG00000038611
Cdhr5	ENSMUSG00000025497
Tmem80	ENSMUSG00000025505
Deaf1	ENSMUSG00000058886
Taldo1	ENSMUSG00000025503
Pddc1	ENSMUSG00000051007
Rplp2	ENSMUSG00000025508
Chid1	ENSMUSG00000025512
Ap2a2	ENSMUSG00000002957

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PAX5	MA0014.3	chr7:148176064-148176076	GTGGTCACGCTC	-	6.62
STAT1	MA0137.3	chr7:148176847-148176858	TTTCCTGGAAA	-	6.62
Stat4	MA0518.1	chr7:148176844-148176858	GCCTTTCCTGGAAA	-	6.15
TFAP2B(var.2)	MA0812.1	chr7:148176266-148176277	AGCCTGAGGCT	-	6.02
ZNF263	MA0528.1	chr7:148176223-148176244	GGAGGAGGAAGAGCAGGAATC	+	6.35

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01527

chr7:148127056-148195453

Th_Cells

Enhancer Sequence

GAAAAGAGGA AAACATGACA GGAAGCTACT GCCATGCTGG CCTCCGGATC CCCTCCAGCA 60
CCCACTTCCC ACCCTGTCCT GACTCACGAC ACTTGTGTCC CCCCAAACAA GGACATGCAC 120
AGCCGCAGCA TGAAGTGGTC ACGCTCAGGG GACCACACTG GCTCTACAGC CACGATAACC 180
ACCACCATCA ATGTGCCCAG TGAGGTCTCA GTGCCTGACT ACCTGATCTG GTCCCTGTTT 240
AGCACACTCT TCATGCTGTC CAGATTCTGT GGCCTATGCC GGACGGTGAA CGTGGAGGAG 300
GAAGAGCAGG AATCTGAGAA GCTGAGAACG TGCTTGAGCC TGAGGCTCCA CCTTGCCCAA 360
ATAGTGCCTG GTGTGTGTTG GGGGAGGGGG GAGCTTGTGC TGTGGCTGAA TGACAGTCTG 420
TTTGTCTGTG TGTGCCATGG AGTTGGAGGA TGATACCTTG GAGATATCCA AGGTATATCC 480
TGGGCAGATA CAAGGTGATG TTGCCAGGAT ACCCTTGGGG TCAGATTGTA CCCCCCACCC 540
CCACCCCCGG CCTAGAGGAA TTCTTACTGT CCAGTTCATG AAAAGCCTTT TCACCTTGCA 600
GACTGGGCAC AGACAGGACT CACGGGAAAC AGAAACCCAA ATGTAAAACG CCAAGATGCC 660
TGTGCTAGGA GCTCCCACAC AGTCTGTGCG TGAAAGGGGA ACAGGGTCCC TGGCCTAACA 720
GAGGCTGCAT TGGGAATGGA AGATGGGGAA CTGAGTTGGA ACACTCTCAG CTCACTGGCT 780
CCTGGGCACC TCACCATCTG TTTTCCTCCA GGCCTGGTAC AGGAAGTGAC TGGGGCTAAG 840
TGGAAGGCTT TTGGCTCCCT GCTGCGGGCA GTGGTTAACA GCGTGCTGGG TAGGGGCCTC 900
TTTTCAAATA ATTGGCCTTT CCTGGAAAGG TAGGGCAGAG AGAACTGTCA ATCCCAACTG 960
CCATTTTCCC ATGGTGCCCA AGAAAAGTGC AAATCCTGAT GCAGACAGTC CTCAAATCTT 1020
GGGTAGATGG CCACTGCTTG ACCTCGAAGA GAAAGATATC TGCTGTGCTG ACAAACTTTG 1080
TCTGGAATTC CAGGGTGGCC CTGGATGAGG ATCCGGGTTC CCTGAACTCA GTGGATGATG 1140
AAATGGGAGT TGGACATCCT CCCCTTTCCT CTGCCCACCC ACCTCCCACA GCCTTGCTCG 1200
GGTTTATTCC TGGTTCTGTG GGTCGTGTTC CTGGGCTTAG GGGCAGCTGT GTGTGAAGGC 1260
AGATAGTCAA CAGGAAGGAG GCTCAGGGCT CGGGCATCCC CTGCCGGTGG TTGGCGACGT 1320
TGGGACACGT 1330