EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-20603

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:88637970-88638390

Target genes

Number: 9
Name	Ensembl ID

Pde8a	ENSMUSG00000025584
Rps17	ENSMUSG00000061787
Cpeb1	ENSMUSG00000025586
Ap3b2	ENSMUSG00000062444
Whamm	ENSMUSG00000045795
Homer2	ENSMUSG00000025813
Fam103a1	ENSMUSG00000038646
Btbd1	ENSMUSG00000025103
Hdgfrp3	ENSMUSG00000025104

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr7:88638131-88638152	GTTTTGTTTTGGTTTCTCTTT	+	6.06
REST	MA0138.2	chr7:88638336-88638357	GGCGCTGTCCATGGTGCCTGC	-	7.67

Enhancer Sequence

TGAATCATAG GGCAATGTGG GGGTTGGGGA AAGATGGAGA AATTAATTTG CAGGAGGAGC 60
CAGTTTCTCA GTCTACATCC AGGGCCGGCT TCCTGGAGTG GACCACACTC AAACTCCAGT 120
TCCCCAATTC AGACCCGTCC CCTACGGAAT TGGTTTTGGG GGTTTTGTTT TGGTTTCTCT 180
TTGAGCCAGC GAATAAAAGG CTGCAAACAT CATCGCAGCT GTTCCATAAG GACCCCGCCT 240
GTCTGGTCCC TCCCCCACCA GCCTTGGGTC CCCCGCCCCT TCGTAGCTAA AGGCGAAGTG 300
GCCCTGCTGC GGGAACCCCG GGAAGCGCGC AGGGCGGGTC TGGGTCGGCA GGGCCGCAGC 360
CTCGCGGGCG CTGTCCATGG TGCCTGCGCG CCAGCCGCAC CCGGCCGGCG CTCGCTAGCT 420