EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-20342

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:53457040-53457640

Target genes

Number: 9
Name	Ensembl ID

Mamstr	ENSMUSG00000042918
Kcnj14	ENSMUSG00000058743
Grwd1	ENSMUSG00000053801
Kdelr1	ENSMUSG00000002778
Ccdc114	ENSMUSG00000040189
Nomo1	ENSMUSG00000030835
Abcc8	ENSMUSG00000040136
Ush1c	ENSMUSG00000030838
Myod1	ENSMUSG00000009471

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HEY1	MA0823.1	chr7:53457552-53457562	GGCACGTGTC	-	6.02
HEY2	MA0649.1	chr7:53457552-53457562	GGCACGTGTC	-	6.02
KLF5	MA0599.1	chr7:53457236-53457246	GGGGCGGGGC	-	6.02
Npas2	MA0626.1	chr7:53457552-53457562	GGCACGTGTC	+	6.02
SP4	MA0685.1	chr7:53457232-53457249	TAAAGGGGCGGGGCAAG	-	6.02

Enhancer Sequence

AATCCTGGAA GCAAAGAAAG GGCCTTAGGA CGGTGAGACG CGGGTGATGG AGGAACACTG 60
CATATAAGCT CACGCAGGCA GGGCAGAGGG CAAGAGAGCC GGAATCCAGG AGCCAGAGGT 120
GAGCAAGGGA TACAGAGTAG CTGTGGTTGG GATGGGGGCA GAGGGAGGAG CTTGGCAGTC 180
ATAGCGACGG AGTAAAGGGG CGGGGCAAGC AAGAAGCCGC AGGAAGTACT TAGAGGAGCC 240
TGTCCCTGTC CCTGCTTTGT TCAGCCGGTG GTGGCCACTG TGGCTCCAGG GATACCACTG 300
GGGTCTGGAT GCCTAGGTGG CTGGCCCATG TCTCACAAGA AGTCTCGTTC TGCTGGCCCA 360
AGCTGGCCTT CTACATCGCC ATTGGAGGCT GTGACCAGGC CAAAAGAGTG AATCCATGGC 420
TCTCCACTTA GTACTCTGAC CTCATGGAGG GGAGCAGGCC TGTCTAAGGG GTTTCTTGGC 480
CTGGAGAACA CAGCCACAAA GTGACTGAGG AAGGCACGTG TCAGTCTGTA CCAAGGGAAG 540
AAGTGGGTGG GGGGTAAGAT TAGGAGTAGG AGTCTGACTG ACCTAGGAGT TACAAAGCCT 600