EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-20173

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:35389890-35393380

Target genes

Number: 9
Name	Ensembl ID

Uba2	ENSMUSG00000052997
Pdcd2l	ENSMUSG00000002635
Gm12774	ENSMUSG00000082684
Gm12764	ENSMUSG00000086184
Lsm14a	ENSMUSG00000066568
Gm12781	ENSMUSG00000085923
Kctd15	ENSMUSG00000030499
Chst8	ENSMUSG00000060402
Cebpg	ENSMUSG00000056216

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr7:35392179-35392191	AAATAAACATTC	-	6.74
RELA	MA0107.1	chr7:35389898-35389908	GGAAATTCCC	-	6.02
RREB1	MA0073.1	chr7:35392886-35392906	CTCCACCCCACCCCCAAACC	+	6.29
SOX10	MA0442.2	chr7:35390835-35390846	AAAACAAAGAC	+	6.14
SP2	MA0516.2	chr7:35390761-35390778	GGGGGGGTGGGGCTTAG	-	7.23
TFAP2B(var.2)	MA0812.1	chr7:35390857-35390868	AGCCTCAGGCT	+	6.02
ZNF263	MA0528.1	chr7:35393231-35393252	TCTTTTCTCCCTCCCTCCCCT	-	6.15
ZNF263	MA0528.1	chr7:35393242-35393263	TCCCTCCCCTCCTTTTCCCCC	-	6.25
ZNF263	MA0528.1	chr7:35393239-35393260	CCCTCCCTCCCCTCCTTTTCC	-	6.32
ZNF263	MA0528.1	chr7:35391409-35391430	TTTTTCCCTTCTTTCTCCTTC	-	6.41
ZNF263	MA0528.1	chr7:35393236-35393257	TCTCCCTCCCTCCCCTCCTTT	-	7.74

Enhancer Sequence

AATGCCTTGG AAATTCCCAA ATCCCTCACT CTGGAATGCA ATGATATTGT ATTAAAAATG 60
GCCCCATGTG GGGTTTTTGT TGTTGTTCTT GTTCTTGTTG TTGTTTTAAA AAACAAAACA 120
ACAAAACAAC CAAAAAAAAA AAAAACCCTT CGGTTAGCCT TGTTTCCCTG TAACAACACC 180
CTCATTTTAA AGGTCGTGGT GTGGGGCTAC TGGGGTGGGG ACCTGAGACC CTTCCCTGCT 240
TACCTGTATT TCTGATCTGA GGCCTGTGTG TTCAGAAACA CTCTTTCCCT CTGAGTTTCG 300
GCAGCTAAAT AAGTTGCAGG CCCTTCAGCT ATACTCATAA AAATTTGCTT CCAGACAACA 360
TGGTCTGTTT ATTGTGTAAT AATCGAAATG GCACTAAATC GTGGTGATTG CCGAACACTT 420
AGGAATCGTA TTAACCTCTT CAGTGCTAAG TGGGTTTCTG CCACCCCCCA GCTCCAGTCA 480
GGCTTCTGCC ACCAGACCTT CCTTATCCAG TGTCAGAGGC GAAATGAAAA TTCTCAGGCC 540
TGAGGCTGAG GCAGAAGGAT TATAACTGTA AGGTCAACCT GGGTTATATA GGGGGTTAGA 600
GGTTAGCCAG GTCAATCTAG TGAAACTCTG TCTCAAATCC AAAACTGGAG AGTTCTTCAA 660
TGGTAGAGCA CCTGCCTAGA ATCCCCCAGT GAGAGGCTGG GGGTGTAGCT CAGTGGGAGA 720
ATACCTGCTT AGAATCCCCC ACTGAGGGGG TATGGGCATG GCTCAGTGGT AGAACACTTG 780
CCTAGAATCC CCCAAGTGAG GGAATGGGGA TGTGGCTCAG TGGTAGAACA CTTGCCTAGA 840
ATCCCCCCCC CCCCAAGTGA GGGATTGGGA TGGGGGGGTG GGGCTTAGTT CTAGAGCAAT 900
TGTCCACTAC GTGCAAGGCT CTGGGTTCAA TTCTCAGTAT GCCCCAAAAC AAAGACACAA 960
AAGCAAAAGC CTCAGGCTCG AGGTGCGTAC CGGTAACAGG CTAGATCCTC CTTGCCTGCT 1020
GAGTGTCACC TGAATGGAAG ATAGAGCCGA AATGGGAGCT GCCTTCTGTT GAATGCTCCC 1080
AGAGCTCTGA TTGCCCATCC TTGGCCCCCC AAATCCCCAC TTCTGTCCCC TGGCTGCAGC 1140
GCATGTGTAT TTTGATGGCA GTTGTTTTGG AGAATAGATT CTTCCAAGAG CAACGAAGAG 1200
AGCTGCCTGG TCGCTGAAGC TCCCTCCGTT GAGTAGTTGC TGGGTCCTAG GAGCGGTAGC 1260
CCCTGCCACC CTGCAGGACG CCTGGCTGCA GTGGCCTTGG CATCCCTGGG CCTTGTTCCT 1320
GAGCGGCAGG CAGGCCCGGG AAGGAAGAGT TAACCAGAAA TGGAGCGGCG CTGCTCCGGG 1380
GCAGGCAGCC TTGCTGCAGA ACAGAGCAGC ATTCGTGCGA AGGCAAGTCA TTTCCCGAAA 1440
CAGTGCAGAC ACACGGCCTC AGGCAGCCTA AAACCTTTGG AGACCAAAAT GGCTCGCAGG 1500
GGTTGGAAGT AATAAGGTGT TTTTCCCTTC TTTCTCCTTC ACTGAGATTC TGTGAGGTTG 1560
CTTTGCATGG CTAGGGAACA GTGGTCCAGT GTTTTTTTGT ATTTTCAATG GGTATTAAGA 1620
TCCATTACAT TGTGACATTT TTAAGATTGG TTATCCTGTA GTTTGGTGTT AAATTGAAGT 1680
TGTTTGTTTT GAATTTAATT CTTTCATTTT TCAAATAGCA AATGTGGAGT TGCCGGGGCT 1740
GGGCATGGGG TTGGCTTACT GAAGCAAGGT TTAGATAACG AACACGGGTC ACCCCGAGAC 1800
TTTGGCAGAA TTTGCCAGGG TGGCACTTAA CCTATTTCCC TATGGGATAG TCAATGAAGC 1860
TCCTTGGAGA CCACTTTCAA AACCAGGAGG TAGGGGTTGC CTCCACTGAC TCTCAAGAGC 1920
AACGCGATAG GAACAGCTTT TTAATAAAAT GTTCTACAGC CAATCTGTTA TGGCTAATGC 1980
AGCCTGCATA TAATTATTCC CTCTCTATGT CTACGACAGC AGTCGAATCG GCTTCCATCC 2040
AACAAATGAC CCAGCAGCAG TGGGCCAGCC GCCACTGAAA ATGACATCTG TTAACTCTTT 2100
GTCACATGCC CCGTCCTTCC CTCTTTCTCC TCAAACGGCT CTGCGGTTAA TTAGGCGCAG 2160
AGCATCTGAC ACAGGCTCTC GAGTGGAAAG ACCTGCTTAG GGGCAGGGAA AAGTCTGGCT 2220
CCAAGTAATT CTCTCCTTTC TCTCCCTTAA AAAATAAAAT AAAATAAAGA ACCATAGCAA 2280
ATTGCTATAA AATAAACATT CATTCAGAGC GCCAGAATAG GTTGTAGGAA TATGTTTTGA 2340
TTACTCCCCA AGATTACAGG GTTACTGTAA AGCTTGGTGT CTTGAGACCC GGGCTTTTGT 2400
GGGAGGAGAA AAAAATCACA TCAAATTCTT GTTAAACCCT AAGAAATTTT CCATCAGAGG 2460
AAGAGAGGCA GCCAACAGTA CCCCTGCTGC CCATGGGTTT AGGATCAGGC ACACATCTGT 2520
CCAGCCATTA CCAGCCCAGT TAATGGAAAG CAGTTTCATT GTAATTGGTC ACTGGAACTT 2580
GAAATGACCA ATCTGATAAG CGCAAATTTA GGACCAGCCC CAGCTAAGGG GCACACACTG 2640
CCTTTGCATT GGACCAGACT TCCTAGAATC TGTGCGTAGC AACTGTATCC ATCACTGGAT 2700
TTGGTACTGT ACTGTACTGG TAGAGATAAG GGTGGTAGTT CCTCCTCCTC GACTTCCATC 2760
CTTCCCTCAG CTGCAAAGTT CCAATCATTC TGGAATCCAT AGTTCGGGGC TGAACATCTG 2820
TGATCTGCTA TACCACTGTT CTCAGCCTGT TTGCCCAACC TGGGCTCATG CCAAGTGTCT 2880
CAGCTATGTG CTTGTCTGCT GGCTTCCCGA CCTGGGGATC CTCCAAAGCT TTGGCTACAA 2940
TGTAAATGTA CAATGTAGCT AGCCTACTAC CAGAGGACCA GAACACCACT ATCCCACTCC 3000
ACCCCACCCC CAAACCTGCC TGGATGCTTG CTTGACCTTG CAAGAGCAAG CATGACTTCC 3060
CTATCTTTGC CTGTCTGGAG AGAGAGGGCC CAGAGGGGTG GCATGCACCA GGAGAACCTT 3120
CCAAGCCATT CCTAGCCTGG AGGAAACTCC GGGTATCTAC ATCCTTGCTG TAAAGCTGAG 3180
CAGCTTGCGA GACTCAAAAT GTCTTACTTT GCCCTTGATG GAGCAAGTCA AAGGATGCCG 3240
TCTTGTCCCA GATGCAAGCA GGGAGTGTTC TTTAGGGGAG CAGTAGAGGG AACTGGTTTC 3300
ACCCCAACAC TCTCAACACT GATTCCATTT CTTTTACCAT TTCTTTTCTC CCTCCCTCCC 3360
CTCCTTTTCC CCCCTCTCCC TTACTTCTCC GTGCAAGGGA TCAAACCTTG CACATGCTAG 3420
ACAAGTTCTG TACCACTGAG CTACACCCAC AGCTCCTCTT TGCCAGTTCA GATAGAAATG 3480
TATTTTTAGT 3490