EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-20123

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:30201830-30203290

Target genes

Number: 19
Name	Ensembl ID

Sars2	ENSMUSG00000070699
Sirt2	ENSMUSG00000015149
Hnrnpl	ENSMUSG00000015165
Actn4	ENSMUSG00000054808
Eif3k	ENSMUSG00000053565
Ryr1	ENSMUSG00000030592
Rasgrp4	ENSMUSG00000030589
Fam98c	ENSMUSG00000030590
Spred3	ENSMUSG00000037239
Ggn	ENSMUSG00000031493
Psmd8	ENSMUSG00000030591
Catsperg1	ENSMUSG00000049676
Kcnk6	ENSMUSG00000046410
Yif1b	ENSMUSG00000030588
2200002D01Rik	ENSMUSG00000030587
Spint2	ENSMUSG00000074227
Ppp1r14a	ENSMUSG00000037166
Dpf1	ENSMUSG00000030584
Sipa1l3	ENSMUSG00000030583

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESRRB	MA0141.3	chr7:30202229-30202240	TCAAGGTCAAT	+	6.02
Esrra	MA0592.2	chr7:30202228-30202239	TTCAAGGTCAA	+	6.14
Nr5a2	MA0505.1	chr7:30202225-30202240	TAGTTCAAGGTCAAT	+	6.13
PRDM1	MA0508.2	chr7:30203255-30203265	GTGAAAGTGA	-	6.02

Enhancer Sequence

AACATGAGGA CTGTATTAAA GGGTCACAGC GTTAGGAAGG AAGGTTGAGA AGTTCTAAGT 60
GCTGGAATAA TGGTTGTGTA CAACCAAGCC CAGCTAAGGC ATTTTCAACA TGGGTGGGGG 120
CAATCATCGT CAAGTTTGGG GCCAGCTGAG GCTGCAGGGT GAGAACCTGT CTCAAAAAAA 180
ACAAACAACA ACCCCAAGGA AGAACACACA CATATACCCA CTTCTATTCA CTCACAGTCC 240
TGAGTAGTCC TGAATAGTCT TGTGCAATGC TAAGCCAGAG CTGGGGGTGT GGCTTGGCTA 300
GATGCACAGC CCTAACCTAG CACAAAGTGG CTCTGGGCTT GACCCCTAGC ATCGCATAAA 360
CTGGGTCTTA ACCTGTAATC TCAGCACTCA GGAGGTAGTT CAAGGTCAAT CTTGTCTCTG 420
AAGATAAAGC CTACCAACCA AAGGAAAAAA AAGTATAACA ATTTTCTACA TCAAAGCCAG 480
CCTCATCCAG CTCCAGAGAG GGGGCACGTA ATAACTTTCT TCCCCTCCAG ATCCCAGCAG 540
ACCCCAGGGC AGGCAGTGCC ACTCCCAAGG CAGTGAGGTG ACAGGGGGCC GAGTGATGAG 600
TGAGAATGGA AAGCCCACCG CTGTTCTCTA GGACACCGTG GCAGGTGGTT ACACACTCAG 660
ACTCCTCCCG CTTCAGACAA GTCTGCAGTG GGCTGGGTCA GAGGATGCAG AGCTCTGGAG 720
GGTTAATCTC AGTTACTACA AAGGTACTAC AAAGGTCTGG TGGGGGGAGG GGAGACTTCT 780
GTGCCAGACT GCTTTCTTAG TAAAAAGGAG TTGCTGCTCC CAGCATTTCC CTTCCAGTCT 840
TCTGAATTTG AATGCTTCTG TTCCACGTGC CCCTCCCCCT CCCCCACATA CACTTTTTCC 900
CCCCCTTTTC CTGAGACAGG GTCTCACTAT GAGCCTTGGC TGGCCTGCAG TTCACTATGT 960
AGAACAGGCT AGCCCTGAAC TCACAGGTTC ACTTGCTTTC CCTCCTGAGT GCTGGGATTT 1020
ATGCTGTGTA CCCCTCCCCC AGCCACGCCC AGCCATGCCA GTGCTGGATG ACAGGAATGT 1080
GCCACTCACT GTCCCCACTT CTCTGTCTAG ACACCCACCG GTCGCACCCA CCCTTCTGTC 1140
CAGGGACAGT TACCCATTTG GTTCCTGAGC TTAGCCTTTT CCTGGGGTTT CTGTCTTCCA 1200
GTAGACACAT CAGCCATGGG ACAAGTCACA CCTACTGTGT GAGCCTCCTC ATCAGGGCCA 1260
TTTGATGGCT GGAAGGAGAC TGATCCCAAC CCGTATGTGC ATGAGGCCTG TTCTCCACCG 1320
GGGCCCTGCT CTGAGCACTG TTCCTAGGTT GGCTCCTTTG ATCAGCACAA TCCTCCTAGA 1380
GAGGTATTAT TGCTATCTAT CCCTTTTTTA CACAACAGGA ATTGAGTGAA AGTGACTTGC 1440
ATAAGGTTAC ATTGCGGTAC 1460