EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-20094

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:29856320-29856580

Target genes

Number: 29
Name	Ensembl ID

Pak4	ENSMUSG00000030602
Fbxo27	ENSMUSG00000037463
Fbxo17	ENSMUSG00000030598
Mrps12	ENSMUSG00000045948
Sars2	ENSMUSG00000070699
Sirt2	ENSMUSG00000015149
Nfkbib	ENSMUSG00000030595
Rinl	ENSMUSG00000051735
Hnrnpl	ENSMUSG00000015165
Ech1	ENSMUSG00000053898
Lgals4	ENSMUSG00000053964
Lgals7	ENSMUSG00000053522
Capn12	ENSMUSG00000054083
Actn4	ENSMUSG00000054808
Eif3k	ENSMUSG00000053565
Map4k1	ENSMUSG00000037337
Ryr1	ENSMUSG00000030592
Rasgrp4	ENSMUSG00000030589
Fam98c	ENSMUSG00000030590
Spred3	ENSMUSG00000037239
Ggn	ENSMUSG00000031493
Psmd8	ENSMUSG00000030591
Catsperg1	ENSMUSG00000049676
Kcnk6	ENSMUSG00000046410
Yif1b	ENSMUSG00000030588
2200002D01Rik	ENSMUSG00000030587
Spint2	ENSMUSG00000074227
Ppp1r14a	ENSMUSG00000037166
Dpf1	ENSMUSG00000030584

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESX1	MA0644.1	chr7:29856442-29856452	GTTAATTGGT	-	6.02
KLF14	MA0740.1	chr7:29856490-29856504	TGGTGGGCGTGGCT	-	6.09
SP1	MA0079.4	chr7:29856491-29856506	GGTGGGCGTGGCTAA	-	7.88
SP3	MA0746.2	chr7:29856491-29856504	GGTGGGCGTGGCT	-	6.78
SP4	MA0685.1	chr7:29856489-29856506	GTGGTGGGCGTGGCTAA	-	7
SP8	MA0747.1	chr7:29856491-29856503	GGTGGGCGTGGC	-	6.62

Enhancer Sequence

TATGCTAATT GAGGCGGGGG CTGGCTCACT TAGTTAGGCA AATTAAGCGG TAATTAGGGA 60
ATGTTAGCAG CGCCAATGAC GCAGAGCGAA TGCCATGGGA ATCCTAGCCG GCAAACGAGG 120
ATGTTAATTG GTTTCCTCAG GGTTCGCAGT CCTCCAGCTT TGGTTAGCTG TGGTGGGCGT 180
GGCTAATACG AAAGACCCCA CTGGTCCAGA GGCACAGCCA GACTGTGGGT GAGAAAAGGG 240
CTGGCTTCCG CTGAGGACCG 260