EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-20085

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:29651300-29651710

Target genes

Number: 33
Name	Ensembl ID

Supt5h	ENSMUSG00000003435
Rps16	ENSMUSG00000037563
Plekhg2	ENSMUSG00000037552
Med29	ENSMUSG00000003444
Paf1	ENSMUSG00000003437
Lrfn1	ENSMUSG00000030600
Pak4	ENSMUSG00000030602
Fbxo27	ENSMUSG00000037463
Fbxo17	ENSMUSG00000030598
Mrps12	ENSMUSG00000045948
Sars2	ENSMUSG00000070699
Sirt2	ENSMUSG00000015149
Nfkbib	ENSMUSG00000030595
Rinl	ENSMUSG00000051735
Hnrnpl	ENSMUSG00000015165
Ech1	ENSMUSG00000053898
Lgals4	ENSMUSG00000053964
Lgals7	ENSMUSG00000053522
Capn12	ENSMUSG00000054083
Actn4	ENSMUSG00000054808
Eif3k	ENSMUSG00000053565
Map4k1	ENSMUSG00000037337
Ryr1	ENSMUSG00000030592
Rasgrp4	ENSMUSG00000030589
Fam98c	ENSMUSG00000030590
Spred3	ENSMUSG00000037239
Ggn	ENSMUSG00000031493
Psmd8	ENSMUSG00000030591
Catsperg1	ENSMUSG00000049676
Yif1b	ENSMUSG00000030588
Spint2	ENSMUSG00000074227
Ppp1r14a	ENSMUSG00000037166
Dpf1	ENSMUSG00000030584

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3

MA0041.1

chr7:29651690-29651702

AAAAAAACAATC

6.44

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_03189

chr7:29634978-29653123

TACs

Enhancer Sequence

CTGACTGTGC CTGTGTCCTT TATGTGTGAC TGAAGAAATT GAGACTCAGA GAAAAACATA 60
GTAACCCAGG GGCAAAGTGA GCCTGTGTCT GAGACGCTGT TCAGGACTTG CTGCGCAGGG 120
GCCCAGTAGG GTTTCCTTTG GGGAGCGATC AGGTATGGGG TGGGAGTGGG GGTAAAAAGT 180
CAGGCTGTGT AACCCAGGTC GGTTAAATTG TGGCCACTCC CTTGTCTCAG CCTCCCAAGT 240
ACTGGCAGAA ATTACAGGGA GTACGATCAC ACCAGTTACT TTATAAGTGT GTGTGTGAGA 300
GGCAGGCGGA TTTCTGAGTT CGAGGCCAGC CTGGTCTACA AAGTGAGTTC CAGGACAGCC 360
AGGGCTATAC GGGGAAACCC TGTCTCGAAA AAAAAAACAA TCCCCCCCCC 410