EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-20078

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:29502050-29502350

Target genes

Number: 28
Name	Ensembl ID

Fbl	ENSMUSG00000046865
Timm50	ENSMUSG00000003438
Supt5h	ENSMUSG00000003435
Rps16	ENSMUSG00000037563
Plekhg2	ENSMUSG00000037552
Med29	ENSMUSG00000003444
Paf1	ENSMUSG00000003437
Pak4	ENSMUSG00000030602
Fbxo27	ENSMUSG00000037463
Fbxo17	ENSMUSG00000030598
Mrps12	ENSMUSG00000045948
Sars2	ENSMUSG00000070699
Sirt2	ENSMUSG00000015149
Nfkbib	ENSMUSG00000030595
Rinl	ENSMUSG00000051735
Hnrnpl	ENSMUSG00000015165
Ech1	ENSMUSG00000053898
Lgals4	ENSMUSG00000053964
Lgals7	ENSMUSG00000053522
Actn4	ENSMUSG00000054808
Eif3k	ENSMUSG00000053565
Ryr1	ENSMUSG00000030592
Fam98c	ENSMUSG00000030590
Spred3	ENSMUSG00000037239
Psmd8	ENSMUSG00000030591
Yif1b	ENSMUSG00000030588
Spint2	ENSMUSG00000074227
Dpf1	ENSMUSG00000030584

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr7:29502159-29502179	CCCCCAACCCACCCCACCCC	+	7.32
RREB1	MA0073.1	chr7:29502160-29502180	CCCCAACCCACCCCACCCCA	+	8.71

Enhancer Sequence

CGGACAGGTA CGGACCTGGG ATGGGACTCG AGGGTCGTGT CCAAACCAGC GGCTGGAGCA 60
GTCTGGAGAA TGGAGGAGTC TCTCCACTGG CTCTGTGTGC CCCTCCCCGC CCCCAACCCA 120
CCCCACCCCA GGGACGCAGT CTCCAGGAGT CTGTACATCG TTTCCCAGAC TCTTCCCTTA 180
TGCAGTGCAC TCTTACACTG AGCTAGCTGT ACACGTGCAA GTTGCAAAGC TACAAGTCCC 240
ACTGAGAAGA CTTTACATTC CGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG 300