EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-20039

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:28009800-28011370

Target genes

Number: 22
Name	Ensembl ID

Egln2	ENSMUSG00000058709
Rab4b	ENSMUSG00000053291
Mia1	ENSMUSG00000089661
BC024978	ENSMUSG00000078786
Snrpa	ENSMUSG00000061479
Mir1191	ENSMUSG00000080533
Itpkc	ENSMUSG00000003752
Adck4	ENSMUSG00000003762
Gm15567	ENSMUSG00000084974
Numbl	ENSMUSG00000063160
Ltbp4	ENSMUSG00000040488
Shkbp1	ENSMUSG00000089832
Gm20479	ENSMUSG00000092367
Blvrb	ENSMUSG00000040466
Pgam1	ENSMUSG00000082016
Sertad3	ENSMUSG00000055200
Sertad1	ENSMUSG00000008384
Gm15541	ENSMUSG00000087371
Pld3	ENSMUSG00000003363
2310022A10Rik	ENSMUSG00000049643
Akt2	ENSMUSG00000004056
Map3k10	ENSMUSG00000040390

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NR2C2	MA0504.1	chr7:28010722-28010737	TGCCCTCTGAACTCT	-	6.03
Nr5a2	MA0505.1	chr7:28010658-28010673	GAGTTCAAGGCCAGC	+	8.25

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_07772

chr7:28007485-28014407

Intestine

Enhancer Sequence

GCTGGCCTGG AACTCACCGT ATAGACCATA TCTACCTGCC TCTGCCTATG GGATTAAAGG 60
TGTGCACCAC CACATGGCTT GTAGGGGTTA AACTTTAGGT GTGTGATGTC CTTGGATAGG 120
ATGAGTGAGC CCATCTCTCG TGCCCTGATT TCTTCATCTG TGAGAAGGGA CAACAACAGT 180
GTATGTGTCA CAGGACTGCC ATGCAGAATA ACAAAGTAGC GGAGCATGCG TGTGACAGTT 240
GCAGCTGGGG ATGTTGCTGT TAGTCATCCA GTTCCCACTC AGCTGTGCCA AGCCAGCCAG 300
GTGACGGGAG GGCAGGCCCA GGGAAGAGCC ACGGCACAAC GCCCTGGAGG GCTGGCTCTT 360
CTGTGTGGGC ATTAACACGT CTAGGCAGGT CTGTTTCTCA CAGCTGGGAC CACATGTGTG 420
AACATGTCCC ACAGGGAGGT ACACAAGCTG AGGGGGGTGG GGGATCAAGG TAGACTCCAG 480
GGGCCGGAGC CCAGTAGGAC TACACAGAAG AGCTGGCAAC CAGATGGACT GGGCACCCCA 540
CCCGAGGCTC TTTTCCACAC CTGTGTCTGC TCTGCCTCTC CCTCCCTGAA CCTGCCCTGC 600
TAGCTCCTCT GATTCACCAG GGGAGAGCCG CGCCCAGGCT GGGGGCAAAG GTGGAAGATG 660
TAAATAAGAG TCTGAAGGGG CCCCTTGGGG AATGGAGGAG TACAGGAGAT TAGGTGGGTA 720
CCTGGATAGG CTGAGGATCC CTGAGCATCT TGCCCTTTGA GCATCTAAAG AAAAGCTAGA 780
AATAGCCAGC CTGTTGGCTC ATGCCTGTAA TCCCCACACT CGGGAGGGCT GAAGCAGCAA 840
GATCAAGATT GTTATCAGGA GTTCAAGGCC AGCCTGGATA CAAGGTGGAT GCTTGGCTAG 900
GCTGAGGATT CTTGAGCCTT TTTGCCCTCT GAACTCTTTT TTTTTTAAAG ATTGTATTTT 960
TAATTATATG TGTGTGGGTG TGGGCAGGTC TCTGTGACTG CAAGTCCCCA CAAAGGTCAG 1020
AGGCTTTGGA TCCCTGGGAA GTGGAGTTAC AGGCAGTCAC CATGCTGGAT ATCAAACTGT 1080
GGTCCTCTGC AAGAGCAGTC CGTTCACTTA ACTGCTGAGC CAACTCTGCA GTCCCCTAAC 1140
CACCTTTGAA CAGTTAATGA AAGCTGGGCC TGTTGGCTCA TACCTGTCAT CCCGGCCTTT 1200
GGAAAGCTCC AGGGAGCAAA ACTGTTACTA GCTCGCTAAC TTAGATGCAT GCTGGATACC 1260
TGGCTATCCA GGCTATTTGG TCCTTTGAAG ATCTAATGAA AGCTGGAGGC AGCAGCTTGC 1320
ATTGGCTATG GCTCGTGCCT GTTAAGCTCA GCCTTGAGAA GGGTTGGGGT TGGGGAGCTG 1380
GAGAGATGGC TTGTTGCTCT TGTTGAGGGC TGAGGTTTGA TTCCCATCAC TCAAAAATGG 1440
TGGCTCGCAC CATCTGTAAG TCCAGGTCCA GGAGATCTGA CTCCTTCTTC TGACCCTCCG 1500
AGGTAGCAGG CATCCATGCA GGTAGTGCAC ATAATATGCA TGCAGGCAAA ACACACACAC 1560
ACACGTAAAA 1570