EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-20015

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:25963300-25964590

Target genes

Number: 19
Name	Ensembl ID

Zfp428	ENSMUSG00000064264
Rps19	ENSMUSG00000040952
Atp1a3	ENSMUSG00000040907
Grik5	ENSMUSG00000003378
Zfp574	ENSMUSG00000045252
Pou2f2	ENSMUSG00000008496
D930028M14Rik	ENSMUSG00000074274
Dedd2	ENSMUSG00000054499
Zfp526	ENSMUSG00000046541
9130221H12Rik	ENSMUSG00000090330
Gsk3a	ENSMUSG00000057177
Erf	ENSMUSG00000040857
Cic	ENSMUSG00000005442
Pafah1b3	ENSMUSG00000005447
Prr19	ENSMUSG00000058741
Tmem145	ENSMUSG00000043843
Megf8	ENSMUSG00000045039
Lipe	ENSMUSG00000003123
Cxcl17	ENSMUSG00000060188

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TBX20	MA0689.1	chr7:25964166-25964177	CTTCACACCTC	-	6.02
ZNF263	MA0528.1	chr7:25964142-25964163	CTTCTCTCTCTCTCCTGCTTC	-	6.06
ZNF263	MA0528.1	chr7:25963669-25963690	GAAGGAGGGGGGAGAGGAAAG	+	8.54

Enhancer Sequence

AGAACAAGAG ACTGCCAACG GGATTCCCCA AGTTACAGAC TTGGCCCAGA GAGCTGAGGG 60
GTGCGCTGCG GCTCCTTAAC ATCACTCTGG GGCCCCTGGG CTCCGCTTTC CACATCTCTT 120
CACGCCTGAG AAACACCACC GCCTCTCTTC TCCGCGTCCC ATCCCTGGCT GCTTCCACTT 180
CCCGTTCCCT ACCCTTCCTG CCGGCCGGCC AAGGCACCCC GTTCCTTTCT CTCACGCCCC 240
CATTCCCACC CCCAAGCCTT TTCTTGTTCC CAGTCCCCTT ACCTCTCCCC CCCATGCACC 300
CTGCTTGCTT CGGAGCTTCA GACAGCATCA CCAACCATCG CCACACTAAA CCGGCCCCCA 360
CACCCCCAGG AAGGAGGGGG GAGAGGAAAG AAAAAAAAAA AAAGCAGGCG ATACCGCCAC 420
CAGCCCTGAA CCCTCTCTCC TCATTTTCTT CACGGTTACC CCTTCTTCAA ATGCAAGGTT 480
AAAATAGGAT GTCCCACCCA GCCCTGGGAG CTTCTCCGAA GCGCCGCGAC CAGCCAGGAG 540
CGGATGCCAC CTTGCCTCGC GTCTCCGAGC TCACTCCTTT TTGTGTTCGA TGGCCCCAGA 600
TGCGATGTGT TTTTGTTTTC AACACCTTTT TATTGGTGTG GTTTCCCCCC CCCCTTTTCC 660
CCTTTTCTTT ATTTTTTGGC CTGGGGGGCG GCGACGATGA AGCGCCCGCC GCCTGCCTCT 720
TTCGCCAGCT CCGGGGCTGT CTCTGGCTCT TTCTCTAGTC TGCGCTCCCC GCCTCCCTCC 780
TTTTTCTTCT CTGTCTCGGC TCTCGCTCTT CCGTCCTTTC AGCTCCATCC TCCGCCGGCT 840
GCCTTCTCTC TCTCTCCTGC TTCCCCCTTC ACACCTCTTC TTTCCCCATC CTTTTTGCCT 900
CCTCTCCTTT TTTTTCCCCC CTCTTCAACC TCTCAATCCC CATATTTCCT ATCCCAACCC 960
CCCTCCGTCT CTCCTTTGGT TCCTTCACTG CCTCCAACAG CAAGCCGATC CCCCACACCA 1020
CTCTCGCCCC CAAATAATAA AAATACCCAG CCAGGGGGCA AAGCCTGGGT GCGAGCGCCG 1080
GGAGGGAAGC GAGAGGGCCG GGGCCGCAGC AGCGCGGGCA GCCGGAGAGC GGTGCAGAGC 1140
GAGCGGCGCC CGCCCGGCTC CCGCCCGGAG AGCTCTCTGC AATAGGCCGA GCCGGCTGCA 1200
TTAAGCTTCT TGCAATCAAT AAAGCGCGGG TCAGATTATG CAAAGCGCAG ATATTAATAT 1260
GCAAAGTTTT AAAGATTTTT AAATGGAAGG 1290