EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-19950

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:19596890-19598240

Target genes

Number: 28
Name	Ensembl ID

Ccdc61	ENSMUSG00000074358
Mypop	ENSMUSG00000048481
Gm10676	ENSMUSG00000074355
Gm16266	ENSMUSG00000086533
Irf2bp1	ENSMUSG00000044030
Foxa3	ENSMUSG00000040891
Sympk	ENSMUSG00000023118
Dmwd	ENSMUSG00000030410
Six5	ENSMUSG00000040841
Gm4969	ENSMUSG00000085601
Fbxo46	ENSMUSG00000050428
Qpctl	ENSMUSG00000030407
Snrpd2	ENSMUSG00000040824
Eml2	ENSMUSG00000040811
Gpr4	ENSMUSG00000044317
Opa3	ENSMUSG00000052214
U1	ENSMUSG00000064580
1700058P15Rik	ENSMUSG00000089636
Vasp	ENSMUSG00000030403
Rtn2	ENSMUSG00000030401
Ercc1	ENSMUSG00000003549
Cd3eap	ENSMUSG00000047649
Ppp1r13l	ENSMUSG00000040734
Ercc2	ENSMUSG00000030400
Trappc6a	ENSMUSG00000002043
Clptm1	ENSMUSG00000002981
Apoe	ENSMUSG00000002985
Pvrl2	ENSMUSG00000062300

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP2	MA0516.2	chr7:19597794-19597811	CAGGGGGCGGGGGTGAC	-	6.05
ZNF263	MA0528.1	chr7:19598200-19598221	TCCTTTCTCTCTCCCTCCCCC	-	7.23
ZNF740	MA0753.2	chr7:19597289-19597302	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr7:19597290-19597303	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr7:19597291-19597304	GGGGGGGGGGGGG	-	6.03
ZNF740	MA0753.2	chr7:19597292-19597305	GGGGGGGGGGGGG	-	6.03

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_08488

chr7:19596598-19604490

Liver

Enhancer Sequence

ATTCAATTAC TCATTACTTG TCAAGTTTTC TTGTTTGTTT AAGAGACAGA CACACTATGT 60
AGCTATGTAG CCTAGGTTGG CCCCCAAACA GTCCTGCCTC TGCTTCCCGA GTGCTGAGAC 120
CACAGATGTG GGTTACTAGG CCCAACAGCT GGGGCCACTT CTATAGTCAT TACCTCATCT 180
CAAAGCGTAT ATAGCTCCGT GCTCAAGCTG GGACCCAGGC CCCTAGCCTC GGTTTCCTGC 240
CCACAGGTCT TTTCCTTAAT GTCATGTCAA CCCCACAACC CAGCCCACTC TATGTCCCCC 300
CCACCCCAGT GACCCATCCC TCATCGCGTC CTCCTGTCTG TCCACACGTC CCACGTCTGA 360
TGTTGGTACT TTTCCACGTT GGACACCAGC CGGCTGTCCG GGGGGGGGGG GGGGGTCACA 420
CCTGCCCACG CCAGGCAAGG CCAGGCGAGC TGGTGGCCAC CAGAAACCCC GACAGATGGC 480
CCCACCCTCC CCTAAGGACC CTACAACAAC ACCCCGCCTC TCAGGCCACC TGAGGTCCCC 540
AGTGGGGCAG CCTGAGGCCC GAGCCTGGGG ACAGGAAGCC CAAGGCCTGG CTACCCTGAA 600
AGCCTCTTTC AACCTGAGCC TCCTCCCGCC GCCACCGACT CCTCCTGCGG AATAATATTT 660
GGGCTGTTGG CCCGGTTTGG GGGGGGGGGG AGCGGCGGGG GCCAGATCCG GAGGCCGCCG 720
GGGAGAAGCC AGAAACCGCA GGGCTTCCTG CCTCGGGCCG GCGACCCCCA GGCCCGGGGG 780
AGGGCCGGAG CCCGGGGAGA CTGAGGGCCT TTCTCTCGGC CCCAGTTGTT TTTTCCAGGA 840
ACCGGGAGGA ATTCCCCAGG ACAGCCAGCC TGGTGGGACG GCTGACAACT GGGAGCCAGC 900
AAGGCAGGGG GCGGGGGTGA CACGCGGCCC GGGCAAGGCG GGACTGCGAC AGAAATAGAG 960
GGACCCGCCT GCCAGGCGGC AGGTAGAGGC GGAAACTCTG AACTGGGAGA GGGAGGCCAA 1020
AGAAGAGAGC CAAGGAGGGG CCAGAGTGTG GGTGACTAGA AAGACTGACA GAGTGGACCT 1080
AGCTCCATAG GTAAGTGATT GCTATAGCGT ACTCCAGTTG CTGGGTTCCA GCCCCAGCAC 1140
CGAATACACC AGAATAAATC AGTATAGACC AGGTGTACAT CCCTGTAATC CTCGAAAGAA 1200
GACAGAGGCA GGGGGATTGC CATGAGTTTG AGCACCCCAG AGTATGAGAC CTTCTTTCAA 1260
AAATAAATAA AATAAAGGTC TCTCTCTCTC TCTCTCTCTC TCTCTCTGTC TCCTTTCTCT 1320
CTCCCTCCCC CCTTCAAATC TTGCATTCTT 1350