EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-19949

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:19479490-19479920

Target genes

Number: 15
Name	Ensembl ID

Pglyrp1	ENSMUSG00000030413
Ccdc61	ENSMUSG00000074358
Mypop	ENSMUSG00000048481
Gm10676	ENSMUSG00000074355
Irf2bp1	ENSMUSG00000044030
Foxa3	ENSMUSG00000040891
Sympk	ENSMUSG00000023118
Snrpd2	ENSMUSG00000040824
Eml2	ENSMUSG00000040811
Opa3	ENSMUSG00000052214
1700058P15Rik	ENSMUSG00000089636
Vasp	ENSMUSG00000030403
Ercc1	ENSMUSG00000003549
Cd3eap	ENSMUSG00000047649
Gemin7	ENSMUSG00000044709

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PRDM1

MA0508.2

chr7:19479656-19479666

TCACTTTCAC

6.02

Enhancer Sequence

CACCCTGCGA GGTGGGAGAG GGGAACTGAA TACTCTGTGA GCCCCTGCTC GCTGCTCCAC 60
AGTTGGCAAC CCCCCAAAGC CCCCCCGAAG AAAGAGGAAT GCAGTCCCCG GGGAGGGGTC 120
TGTTCCTGTC ACCTCCCTCC GAAGCAAGAA GGATGCTGAA ACCACTTCAC TTTCACCCTA 180
GTGACATGGT GACCTGGGTA AAAGATGCCT GCAGCAAGCC TAGGCCAACT GACCTTGTTC 240
CCACCTCCTA GCTTTTCCCA GCCAGATTTT CTATTTGTCA GCCAAAACCA ACTGATTAGG 300
TCCCTACCCT GCTCAAAGAT CCTTAAGAAA GCACCACATA CACAAGGCTC TCCTTCCCCG 360
CTGCTTATAA ATAGCAAGAA GCAAAGGTAA CCAAGTGTCC AGGGACAGAA CTAGTTGAAT 420
TTCCCTGCGC 430