EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-19928

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:17346260-17347530

Target genes

Number: 19
Name	Ensembl ID

Zc3h4	ENSMUSG00000059273
Tmem160	ENSMUSG00000019158
n	ENSMUSG00000065893
Grlf1	ENSMUSG00000058230
Ceacam9	ENSMUSG00000007209
Ap2s1	ENSMUSG00000008036
Slc1a5	ENSMUSG00000001918
Fkrp	ENSMUSG00000048920
Strn4	ENSMUSG00000030374
Prkd2	ENSMUSG00000041187
Dact3	ENSMUSG00000078794
Gng8	ENSMUSG00000063594
Ptgir	ENSMUSG00000043017
Calm3	ENSMUSG00000019370
Pnmal2	ENSMUSG00000070802
Pnmal1	ENSMUSG00000041141
Ccdc8	ENSMUSG00000041117
Ppp5c	ENSMUSG00000003099
Hif3a	ENSMUSG00000004328

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr7:17346431-17346452	GGAGGAAGGCGGGAGGAAGAA	+	6.32
ZNF263	MA0528.1	chr7:17346900-17346921	CTCTCTCTCTCTCTCTCCCCC	-	6.3
ZNF263	MA0528.1	chr7:17346428-17346449	GAAGGAGGAAGGCGGGAGGAA	+	6.58

Enhancer Sequence

GTGTGTGTGT GTTGGGGGGC GGGGGGCGGC AATAATTTTT TGATAAATAA GTCTCATTAT 60
GTACTTCTGG CTCTCCTGGA ACTCAGCACA AACCTGGCTG AACAGAGATC CAGCTGCATG 120
TCTGTTTCCA CCCCTACCCC CAGAAAAGCT TTGCGAAAGA AAGTGGGGGA AGGAGGAAGG 180
CGGGAGGAAG AAAGGTTAGA CAGAGCAGGG AGGAAAAGTT GGAAGGGTAG GAGCCACGGA 240
GAAGGGCATG CTGGGAAAGC TGAGGGGTGC TGTGGGCCAG GGCCCCCATC GCACACCCTG 300
GGGCACGCAC AGCTTTCACC CACACAGGAC ACTTGGAGGC GGCTGGAATG TTAGGGGATC 360
TTTTTACTCT GGGATGGAGG GGGATCTGTA TGCCCTTTTG AGAGACTTCA GCCGTTTCCA 420
GAGGCACAGC CTGAGGGACA GCCCTTGCTC CCCAGAGCCT TCTATGGGCT GCTTGGAGAA 480
CATTCCATTA CAGGACCTTC TGGAACAAGT TGAGGAAGCT TGGCAGCCTC CACTGCCCTC 540
GAGGCGGGGT CATTCTTTGC TCCAGCCGCC CCCTCCTTCT TCAGGACTCT CTCTCTCTCT 600
CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCCCC 660
CCCCCCCTTC TATTCTCTGA CAGGACCCCT TAGGCTGGTA CTTTTATAGA ACACTTTAAT 720
AGAACACATG GGAATTGATC ATTGAAGGCA CATGGCCTGC ACCGGACAGG AAGAGGTAGT 780
GAAATTCCAC CTCTCTCTCT CTTTCCCTTC TTCCGTGCCC TGAGGCTCTT CCCAGGAGGT 840
ACCCCAGCCT GTTTTATCCC ATCCTCAAAG GCTCTCTTGG GAGGACTCCA GGCTCCAGCT 900
GGATAGGCTG TGGGCTAGAG GTTGAGGCTC TGAAGTGCCC ACATCAGAGA CCCCCAGCAG 960
GCTGGGCCTC CCTGCAGGAA GCTCAGAGGG CCACCGGTAG GGAAGGGCAG AGCCTGCATA 1020
CCTGGATCAG GCCTAGTCCA GGGTCCCAGC GCCTGTGTTT GTTCTCAAAG TAGACATTAT 1080
GTAAGCACAC GCAGAGAAAG TTCTACTTAG GACACTCACA GGCCCTAAAG CTCACCGTTT 1140
TCTTACTTAA GAGTGGATTC CTGGGTTGGA GAGATGGCTC AGCAGTTAAG AACACTTGCT 1200
GCTCTTACAG AGGACCAGCG CCTACACAGC AGCTCACAAC CGTCTATCAG TAATTCCAGT 1260
TCTAGGGGAT 1270