EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-19927

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr7:17199070-17199820

Target genes

Number: 19
Name	Ensembl ID

Ccdc9	ENSMUSG00000041375
Bbc3	ENSMUSG00000002083
Sae1	ENSMUSG00000052833
Zc3h4	ENSMUSG00000059273
Tmem160	ENSMUSG00000019158
n	ENSMUSG00000065893
Grlf1	ENSMUSG00000058230
Ap2s1	ENSMUSG00000008036
Slc1a5	ENSMUSG00000001918
Fkrp	ENSMUSG00000048920
Strn4	ENSMUSG00000030374
Prkd2	ENSMUSG00000041187
Dact3	ENSMUSG00000078794
Gng8	ENSMUSG00000063594
Calm3	ENSMUSG00000019370
Pnmal2	ENSMUSG00000070802
Pnmal1	ENSMUSG00000041141
Ccdc8	ENSMUSG00000041117
Ppp5c	ENSMUSG00000003099

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REL	MA0101.1	chr7:17199263-17199273	GGGGATTTCC	+	6.02
ZNF263	MA0528.1	chr7:17199435-17199456	GGGGGAGGAAGTGGGAAAGAA	+	6.53
ZNF263	MA0528.1	chr7:17199675-17199696	CCCTCCCCCTCCGGCTCCTCC	-	7.67

Enhancer Sequence

CAGTTGGGCC CAAATACAAG GAGGAATTAT GTCCAAAGCC AAGACCGGGA GGGCAGTAGA 60
GCAGTGCCTG TATCAACAGA CCAATACGGA TCTCCACGGA GGTGGAACCG CAGGTCCTAA 120
AGGGACAGCT CCTGGGGATG CAAGATGTTC TACCGCAGGG ATAATAACAG TAAATAGGCC 180
AAAGAAGGAG AATGGGGATT TCCTCCCAAA AGTGATGCTA GCAGAAAACA GGTAAGGTAG 240
AAGGGCCACG GATATTCAAA GTGAGCGTCA GAGGGGATAC TGAGGGGTCA ATGAGGAGGT 300
AGACTGTCCC AGGAGCACAG CCGACTCCAG GAGGTGGCGA AGTAGGTATG ACTGGGGGTC 360
GGGGTGGGGG AGGAAGTGGG AAAGAAGACG GCTCAGAATT GGGAGTCGGG TATCTCGAGT 420
GGAGGCTGAG AGACACCGAG ATCCTTCACC GGGTTTGGTG GGGCGTGTGT GGAGGCAGAC 480
GCCGGGATTG CAGGGCTGCG GGGACACTAG CGAATAGGAA GGGCAAGGCG GGCCGCGCGG 540
GCCGGGCCCG GGCATGCAGC GGCCGGGACG CGGGGACCGC GGGGCGCTGG GGGGGGCGCT 600
CCCACCCCTC CCCCTCCGGC TCCTCCATTG TTCGCGGGCT CCGGGCCCCG CGGTCCCCGC 660
CTTTCCCCCC ACCCTTGGAT CCCGCAGCGG GGCGGCGCCC GGCGCCTCGC CCGTCCCCAC 720
ATTCCCCTCC GCCAGCTACG AGACACTTAC 750