EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-19423

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr6:113341990-113342490

Target genes

Number: 21
Name	Ensembl ID

Thumpd3	ENSMUSG00000030264
U6	ENSMUSG00000077431
Gt(ROSA)26Sor	ENSMUSG00000086429
Setd5	ENSMUSG00000034269
Mtmr14	ENSMUSG00000030269
Brpf1	ENSMUSG00000001632
Gm15492	ENSMUSG00000085012
Ogg1	ENSMUSG00000030271
Camk1	ENSMUSG00000030272
Tada3	ENSMUSG00000048930
Arpc4	ENSMUSG00000079426
Ttll3	ENSMUSG00000030276
Rpusd3	ENSMUSG00000051169
Jagn1	ENSMUSG00000051256
Il17rc	ENSMUSG00000030281
Creld1	ENSMUSG00000030284
6720456B07Rik	ENSMUSG00000033940
Vhl	ENSMUSG00000033933
Irak2	ENSMUSG00000060477
Tatdn2	ENSMUSG00000056952
Sec13	ENSMUSG00000030298

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA5	MA0766.2	chr6:113342211-113342221	CAGATAAGGA	+	6.02
Gata1	MA0035.3	chr6:113342210-113342221	ACAGATAAGGA	-	6.14

Enhancer Sequence

TATAGCCTTG GCTGTCCTGG AACTTACTTT GTAGACCAGG CTGGCCTCGA ACTCAGAAAT 60
CCACCTGCCT CTGCCTCCCA AGTGCTGGGA TTAAAGGCGT GCACCACCAC CGCCCGACTT 120
TTTATTTCTT TTGCTGGCTT TCTCCACACT CTGTAAGCTC TGTGAGATTG GGGTCCACTT 180
GACAGCCCTT ACCCCGGAGC CTCAGTGTGT GAGCCAAAGC ACAGATAAGG AGCTCTGATG 240
GTTTGCCCGA GTGCTTGGTT CTTCCATCCT CAGTGCCTGG CAAATCAAGA GTATGTGGCA 300
AGTAAGGTCC AGAGCCAAGA TCACTACGAA AAAAACCTTA TTCGACTTCC CTAAGGCCAC 360
CACGCAGCTA TCGAGGCCTC CACAGAGTCT GATTGTGCCT GGGCAACAGT CTCCTAGGAG 420
ACGGGAAACA AGAGGACGGG GCCCGAGAGG GCGCCAGGGC TGAGGCGCAC TGTGGGGCAC 480
TGCGAGCTGG CTAAAGGCGC 500