EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-18982

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr6:71494020-71494550

Target genes

Number: 9
Name	Ensembl ID

Krcc1	ENSMUSG00000053012
Rmnd5a	ENSMUSG00000002222
Rnf103	ENSMUSG00000052656
Kdm3a	ENSMUSG00000053470
Reep1	ENSMUSG00000052852
Mrpl35	ENSMUSG00000052962
Immt	ENSMUSG00000052337
SNORD94	ENSMUSG00000080465
Ptcd3	ENSMUSG00000063884

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr6:71494330-71494341	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr6:71494330-71494340	GCCCCGCCCC	+	6.02
SP1	MA0079.4	chr6:71494327-71494342	CAAGCCCCGCCCCCG	+	6.23
SP4	MA0685.1	chr6:71494327-71494344	CAAGCCCCGCCCCCGCG	+	6.17

Enhancer Sequence

AGAGCTGGTA AGGGCCAGCG ACCGGGGAAG CTCCGCAGCG GAGGTGGGAA CAGCCAGCTG 60
CGCTCTCAGG CTGGCCCCTA TTTCCGGGGC CTTCCACTCT GCCGAGGGGC CGAGGGAAGA 120
GTTTAGGATT GGGATGTGAG GAGAAGCGCG CCTTGGCCGC TCGGCGTCCG ACCCGGGTGT 180
GTAGGGCCTG GTTAGGAGCA CCTCGGCCTC GCCCCCAGGC GCTGGAGGCG CCACGCCGCC 240
GGGCCCCGAG GAAGCACTCT CTCCCCTGCG CGCGGTGGTA CGGGCCGCCC GGAACCTTTC 300
TCCTGCGCAA GCCCCGCCCC CGCGCCGGCC TGCAGACCAC CCGGAGGACT TGCCCTAGAC 360
CGGAAGGTTG TGTGCGGTGA ACCGGGTCGG AGCCCCCAAA AAGTCCAGGC ACCTGCCAGG 420
CAGGTCCTTT TCTCGCTCTC CTCTGTGTGC AGGGAAGCCC GACTTGTGTT TATTCTAGAA 480
GCTCAGTTCT CTCAGGCCCT ACCCATAAGG ATGCTACCGA AAACAGTTCG 530