EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-18854

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr6:52589630-52590150

Target genes

Number: 11
Name	Ensembl ID

2700086A05Rik	ENSMUSG00000085696
Hoxa6	ENSMUSG00000043219
Hoxa3	ENSMUSG00000079560
Hoxa9	ENSMUSG00000038227
Hoxa10	ENSMUSG00000000938
Hoxa11as	ENSMUSG00000086427
Hoxa11	ENSMUSG00000038210
Evx1	ENSMUSG00000005503
Hibadh	ENSMUSG00000029776
Tax1bp1	ENSMUSG00000004535
Jazf1	ENSMUSG00000063568

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr6:52590069-52590089	CCTCAAACCAACCGCAGCCC	+	6.21
Zfx	MA0146.2	chr6:52590028-52590042	GGGGCCCAGGCCTA	+	6.04

Enhancer Sequence

CACCACTTTG AGGCAGCACA ACTCCATTTC ATAATGGAGT TCGCTCTGCT TGCTGGTCAA 60
GGGTGACAAA CTTTGCTGGA TTTCTAGGAT ACCGCCATGC CACCGACTAG AGTAGTTAAA 120
ACACAAATTA GGCCTTGAAG TCTGAGGGAG CCCCCGCTTA GGGTGAAGCC AGGGAGCTGG 180
AAGGCCAGGG GTCCCAGAGG TGGGTGCGGT GGGGTCACCT CTGGAGCTGA GCCCTCCAAA 240
TGTCCTAGGA GCCCCAAATC CAAAGCGCAC GCCAGGGACC CAAACATTCC TCCCTTCATC 300
ACAAGCTGTT CCTGGGTCCC GCAGAGGAAA CGCTGAACAA TCTGGAGCCG GGCATAGGGC 360
AGGAGTGGAA GGCTGACGGC TCAGGAGGCA GTTACAAGGG GGCCCAGGCC TAGGAGGCGA 420
CCACAATTGT CGCTTTTACC CTCAAACCAA CCGCAGCCCT TCGGGCGAAA AGCCCTCCTC 480
GGATGACCAG AGGAAGAAGA GCAGATGGGG CGCGAGGTCC 520