EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-18844

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr6:52264260-52264760

Target genes

Number: 22
Name	Ensembl ID

Gm15051	ENSMUSG00000087658
Hoxa1	ENSMUSG00000029844
Hoxa2	ENSMUSG00000014704
5730446D14Rik	ENSMUSG00000056445
Gm15050	ENSMUSG00000087626
2700086A05Rik	ENSMUSG00000085696
5730596B20Rik	ENSMUSG00000056468
Hoxa4	ENSMUSG00000000942
Hoxa5	ENSMUSG00000038253
Hoxa6	ENSMUSG00000043219
Hoxa3	ENSMUSG00000079560
Hoxa7	ENSMUSG00000038236
Hoxa9	ENSMUSG00000038227
Hoxa10	ENSMUSG00000000938
Hoxa11as	ENSMUSG00000086427
Hoxa11	ENSMUSG00000038210
Hoxa13	ENSMUSG00000038203
Gm15053	ENSMUSG00000055408
Evx1	ENSMUSG00000005503
5730457N03Rik	ENSMUSG00000086126
Gm8129	ENSMUSG00000059159
Hibadh	ENSMUSG00000029776

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1

MA0073.1

chr6:52264526-52264546

ACCCCAACCTCCCAACCCCC

6.17

Enhancer Sequence

CAAAGGTAGC CACCTTGCCC CTCCGCTCCC CGGTCCGCCC ACTCCACCCA CAGTTCCCTT 60
CATCTCAGGC CAGGTGCAAG ATGCTCCTTT CCCTTGGGGC AGGATGGCTG GGGGTTGGGT 120
GAGTGGGGCG GGGGCACCTG AACAACTCTT TTGCTCTCTG CACCTTAGTG TGTGTGAGGG 180
CTCTCGTGTT ATCCCATTAG AGTGACAGTT GTGCCTGGAC GAATGTCAGC GTTGGCACAA 240
GTCTTGACTT GAGGGGTCCA AAACGCACCC CAACCTCCCA ACCCCCGAGT TTTGTGGGAA 300
TGATTCAGCT AAGACGGAAA GACACATCCG TCGGGTAGGG CAAGATCAAA CGGTTGTCCG 360
GGCAGTTTGA CTGGAGGGGA GCAAGGCACA AGGAGGCGCG GAAGCCCGGA GAATATAAAG 420
GACCGTAAAA TCGTGGCGGA CTCTGGTCTC CGGAGGGCTG CAGCCCTCCG ACCAGTTTGC 480
ACGTCGGTCA GAGGTCCAAA 500