EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM090-18828

Organism

Mus musculus

Tissue/cell

Limb_E11.5

Coordinate

chr6:52003450-52004090

Target genes

Number: 12
Name	Ensembl ID

Hnrnpa2b1	ENSMUSG00000004980
Cbx3	ENSMUSG00000029836
2700086A05Rik	ENSMUSG00000085696
Hoxa6	ENSMUSG00000043219
Hoxa3	ENSMUSG00000079560
Hoxa10	ENSMUSG00000000938
Hoxa11as	ENSMUSG00000086427
Hoxa11	ENSMUSG00000038210
Hoxa13	ENSMUSG00000038203
Gm15053	ENSMUSG00000055408
Evx1	ENSMUSG00000005503
5730457N03Rik	ENSMUSG00000086126

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1

MA0073.1

chr6:52003525-52003545

CGAGGGTGGGGGTTTTGGGG

6.4

Enhancer Sequence

TTTCTTTGAC ATGTTTATGA CAGAAAGACC TAGAATCATC TATCCAAATG ATGTCAAGTA 60
GCCGCTGTTT TCCACCGAGG GTGGGGGTTT TGGGGACTGA CTTTATGGGA TCCAGCAATA 120
TTTTTTTTCT TGGCATACTA GATGAAAAGT CTCCAACAAA AAGCTAGGGA CTCTGGGCTG 180
AAGATCCATA CCCTTGCCTG GGCCATAGTG GCTAGAAACG CCTAAGACTG GCAGCCTTAC 240
TCCAGAACTT TCTTTTGGGC AACATCTGGG GTGAATTAAG TCTCTGTTCA GTCCCAGAGC 300
CGGCTACAGA TGTAGAGGTG TGAGCGTGCC TTCCGGGAGC TGCAGCTTAC ATGGTCATGC 360
TATGGACCAC TTTTATTCGA AGTTCAAGCA CCACATTTCC AGAAGTATGA AGAATGACAG 420
TGAAGAAGAA AGCCTTTAGA GCTTAAGTTA CAACCACATC TAATGAGCAC AGAGGTGTTC 480
CTCCAGTACA GGGGGATTGC TTTTCAACTC CTGTAGCTTA AATGAAGCCA GCGATCATAA 540
CAGTAAATAT GGGTTGCAAA GGTATCCCAG GAGGTATCAT TAGTCACATA GTACACCCTT 600
TTCTAATTTG TACACTTCCC ATGTTTCAGG GGTTTCCCAG 640